RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.41□□□□□ -0.743e-8■■■□□ 19.2
SND1-213ENST00000486037 NRSN2Q9GZP1 204 aa10.41□□□□□ -0.74
SND1-213ENST00000486037 MKRN2Q9H000 416 aaKnown RBP10.41□□□□□ -0.74
SND1-213ENST00000486037 ABCB6Q9NP58 842 aa10.41□□□□□ -0.74
SND1-213ENST00000486037 PANK4Q9NVE7 773 aa10.41□□□□□ -0.74
SND1-213ENST00000486037 FTSJ1Q9UET6 329 aa10.41□□□□□ -0.74
SND1-213ENST00000486037 CPSF3Q9UKF6 684 aaKnown RBP10.41□□□□□ -0.74
SND1-213ENST00000486037 STARD13Q9Y3M8 1113 aa10.41□□□□□ -0.74
SND1-213ENST00000486037 NFE2L3Q9Y4A8 694 aa10.41□□□□□ -0.74
SND1-213ENST00000486037 KPNA7A9QM74 516 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 IKBKBO14920 756 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 OGTO15294 1046 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 HOXC11O43248 304 aaPredicted RBP10.4□□□□□ -0.74
SND1-213ENST00000486037 ATP2C2O75185 946 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 GUCY2CP25092 1073 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 DEKP35659 375 aaKnown RBP10.4□□□□□ -0.74
SND1-213ENST00000486037 PRCPP42785 496 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 WNT7BP56706 349 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 SUZ12Q15022 739 aaKnown RBP10.4□□□□□ -0.74
SND1-213ENST00000486037 TBC1D25Q3MII6 688 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 FUT11Q495W5 492 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 KLHL10Q6JEL2 608 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 FBXL19Q6PCT2 694 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 CACUL1Q86Y37 369 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 GATAD2AQ86YP4 633 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 BBS7Q8IWZ6 715 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 CCDC65Q8IXS2 484 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 CADM4Q8NFZ8 388 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 P2RY11Q96G91 374 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 FGFBP2Q9BYJ0 223 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 HSD3B7Q9H2F3 369 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 SLC39A2Q9NP94 309 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 DDX43Q9NXZ2 648 aaKnown RBP10.4□□□□□ -0.74
SND1-213ENST00000486037 DPP3Q9NY33 737 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 TRPM5Q9NZQ8 1165 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 DEC1Q9P2X7 70 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
SND1-213ENST00000486037 CTNND2Q9UQB3 1225 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 MAPK8IP1Q9UQF2 711 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 ANKRD6Q9Y2G4 727 aa10.4□□□□□ -0.74
SND1-213ENST00000486037 SPTAN1Q13813 2472 aaKnown RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 TISP43B9A030 160 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ENC1O14682 589 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 SLC9A3R1O14745 358 aaPredicted RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 PCDHGA12O60330 932 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 RFPL3O75679 317 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ABL1P00519 1130 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 PLS3P13797 630 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 PAX3P23760 479 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ERCC5P28715 1186 aaPredicted RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 ADSSP30520 456 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 HNF1BP35680 557 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ACADVLP49748 655 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 CCT8P50990 548 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 TPMTP51580 245 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 STX17P56962 302 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 NFKB2Q00653 900 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 MYL5Q02045 173 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 CFAP221Q4G0U5 840 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 COBLL1Q53SF7 1204 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 CT47A1Q5JQC4 288 aaPredicted RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 FAM26FQ5R3K3 315 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 PRAMEF14Q5SWL7 426 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 KIAA1614Q5VZ46 1190 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 SFR1Q86XK3 245 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ENOX1Q8TC92 643 aaKnown RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 NELFBQ8WX92 580 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 TSC1Q92574 1164 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 BICD1Q96G01 975 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 LGMNQ99538 433 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ACBD6Q9BR61 282 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 ZHX3Q9H4I2 956 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 C6orf106Q9H6K1 298 aaPredicted RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 ITM2CQ9NQX7 267 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 SPHK2Q9NRA0 654 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 DNAJC17Q9NVM6 304 aaKnown RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 KCND2Q9NZV8 630 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 TBC1D7Q9P0N9 293 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 PCDHGA1Q9Y5H4 931 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.39□□□□□ -0.75
SND1-213ENST00000486037 NOTCH2Q04721 2471 aa10.39□□□□□ -0.75
SND1-213ENST00000486037 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 TP53BP1Q12888 1972 aaPredicted RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 SPENQ96T58 3664 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 A0A0B4J269 797 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 SMTNL1A8MU46 457 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 BECN2A8MW95 431 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 GOLGA6L19H0YKK7 550 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 TERTO14746 1132 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 FAM13AO94988 1023 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 NTRK1P04629 796 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 MBL2P11226 248 aaPredicted RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 GAP43P17677 238 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 ACOT2P49753 483 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 LIG4P49917 911 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 ZNF131P52739 623 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 PMS1P54277 932 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms