RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 FAM126AQ9BYI3 521 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 LHX5Q9H2C1 402 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 SEMA4AQ9H3S1 761 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 DNAJC17Q9NVM6 304 aaKnown RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 AGO1Q9UL18 857 aaKnown RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 PCDHGA2Q9Y5H1 932 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 MYH10P35580 1976 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 OBSL1O75147 1896 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 ZDBF2Q9HCK1 2354 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 DENND4CQ5VZ89 1909 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 SYCE3A1L190 88 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 LGALS16A8MUM7 142 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 MSI1O43347 362 aaKnown RBP13.06□□□□□ -0.32
PTCD1-205ENST00000485746 GREM1O60565 184 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 GFRA3O60609 400 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 TULP3O75386 442 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 GABBR2O75899 941 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 GFPT2O94808 682 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 KLKB1P03952 638 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 CYP11B1P15538 503 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 TIE1P35590 1138 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 TNFRSF4P43489 277 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 TBX4P57082 545 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 SKOR2Q2VWA4 1001 aaPredicted RBP13.06□□□□□ -0.32
PTCD1-205ENST00000485746 GAB4Q2WGN9 574 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 Q6ZNB5 142 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 TMEM110Q86TL2 294 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
PTCD1-205ENST00000485746 DDI1Q8WTU0 396 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 HINFPQ9BQA5 517 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 DAAM1Q9Y4D1 1078 aa13.06□□□□□ -0.32
PTCD1-205ENST00000485746 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 PROB1E7EW31 1015 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 F8VZ95 297 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 K7EQS6 105 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 PAPSS1O43252 624 aaPredicted RBP13.05□□□□□ -0.32
PTCD1-205ENST00000485746 TSPAN3O60637 253 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 LMNAP02545 664 aaKnown RBP13.05□□□□□ -0.32
PTCD1-205ENST00000485746 STAT1P42224 750 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 SLC11A2P49281 568 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 FNTBP49356 437 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 DGKGP49619 791 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 MRPS21P82921 87 aaKnown RBP13.05□□□□□ -0.32
PTCD1-205ENST00000485746 NCAPHQ15003 741 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 TRIP4Q15650 581 aaPredicted RBP13.05□□□□□ -0.32
PTCD1-205ENST00000485746 EFHC1Q5JVL4 640 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 MSANTD2Q6P1R3 559 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 PKN3Q6P5Z2 889 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 CACNA2D4Q7Z3S7 1137 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 CCDC33Q8N5R6 958 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 SERPINB11Q96P15 392 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 DDX50Q9BQ39 737 aaKnown RBP13.05□□□□□ -0.32
PTCD1-205ENST00000485746 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
PTCD1-205ENST00000485746 GANQ9H2C0 597 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 POPDC2Q9HBU9 364 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 CYTH4Q9UIA0 394 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 COL4A2P08572 1712 aa13.05□□□□□ -0.32
PTCD1-205ENST00000485746 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 FAM170AA1A519 330 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 LRRC10BA6NIK2 292 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 KLF8O95600 359 aaPredicted RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 SERPINC1P01008 464 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 ATP1A3P13637 1013 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 ZNF18P17022 549 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 GBP1P32455 592 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 SOX5P35711 763 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 RPL34P49207 117 aaKnown RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 YWHAZP63104 245 aaKnown RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 CDK17Q00537 523 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 DMC1Q14565 340 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 MPPE1Q53F39 396 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 EMC10Q5UCC4 262 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 PRR23BQ6ZRT6 265 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 CEP68Q76N32 757 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 DHX40Q8IX18 779 aaKnown RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 WDTC1Q8N5D0 677 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 ADAM32Q8TC27 787 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 USP33Q8TEY7 942 aa13.04□□□□□ -0.32
PTCD1-205ENST00000485746 EZH1Q92800 747 aaPredicted RBP13.04□□□□□ -0.32
PTCD1-205ENST00000485746 RNF34Q969K3 372 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms