RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 LAMTOR5O43504 91 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 VNN1O95497 513 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 SP9P0CG40 484 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 NR2F2P24468 414 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 ANXA13P27216 316 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 SLC8A1P32418 973 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 HSPA9P38646 679 aaKnown RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 MTIF2P46199 727 aaKnown RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 SOX9P48436 509 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 CDH8P55286 799 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 ZNF667Q5HYK9 610 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 MIIPQ5JXC2 388 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 CEP85LQ5SZL2 805 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 FOXR2Q6PJQ5 311 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 VSTM1Q6UX27 236 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 CCDC121Q6ZUS5 278 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 ASCL5Q7RTU5 278 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 USP13Q92995 863 aaPredicted RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 TRMT2BQ96GJ1 504 aaKnown RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 FAXDC2Q96IV6 333 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 MYRFLQ96LU7 910 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 TRPC7Q9HCX4 862 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 PLCB1Q9NQ66 1216 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 TFR2Q9UP52 801 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 TRAF3IP3Q9Y228 551 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 CCL26Q9Y258 94 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 DUSP10Q9Y6W6 482 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 R4GN57 208 aa11.27□□□□□ -0.61
DDX56-212ENST00000485367 PTPRZ1P23471 2315 aaPredicted RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 KIF26AQ9ULI4 1882 aaPredicted RBP11.27□□□□□ -0.61
DDX56-212ENST00000485367 SOBPA7XYQ1 873 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 MOCS3O95396 460 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 RPL13P26373 211 aaKnown RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 TNK2Q07912 1038 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 FZD5Q13467 585 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 SNCBQ16143 134 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 MAML2Q8IZL2 1156 aaPredicted RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 ZNF687Q8N1G0 1237 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 GUF1Q8N442 669 aaKnown RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 TTC16Q8NEE8 873 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 LMAN1LQ9HAT1 526 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 GKN1Q9NS71 199 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 TDP1Q9NUW8 608 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 PATJQ8NI35 1801 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 ANAPC1Q9H1A4 1944 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 FAM186AA6NE01 2351 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 PRR23AA6NEV1 266 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 C5orf60A6NFR6 353 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 AKR1B10O60218 316 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 KRT14P02533 472 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 PAEPP09466 180 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 MAGEA1P43355 309 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 RPS9P46781 194 aaKnown RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 ATP1A2P50993 1020 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 VAMP7P51809 220 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 MLLT6P55198 1093 aaPredicted RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 SLC7A5Q01650 507 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 CSTF1Q05048 431 aaKnown RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 CUL1Q13616 776 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 CRYMQ14894 314 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 SGSM1Q2NKQ1 1148 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 ZACNQ401N2 412 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 LACTB2Q53H82 288 aaPredicted RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 RNF187Q5TA31 235 aaPredicted RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 FAM186BQ8IYM0 893 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 B3GALNT2Q8NCR0 500 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 SYN2Q92777 582 aaPredicted RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 LRRC45Q96CN5 670 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 CYP2S1Q96SQ9 504 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 ZNF518BQ9C0D4 1074 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 C8orf33Q9H7E9 229 aaPredicted RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 VRTNQ9H8Y1 702 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 TMBIM4Q9HC24 238 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 SLC40A1Q9NP59 571 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.612e-10■■■■■ 195.6
DDX56-212ENST00000485367 RBM12Q9NTZ6 932 aaKnown RBP11.26□□□□□ -0.61
DDX56-212ENST00000485367 ARHGAP20Q9P2F6 1191 aa11.26□□□□□ -0.61
DDX56-212ENST00000485367 WDR87Q6ZQQ6 2873 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 TRAV19A0A0A6YYK7 116 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 F8VP50 259 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 SPECC1L-ADORA2AF8WAN1 911 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 CLDN5O00501 218 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 AKAP3O75969 853 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 CKMP06732 381 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 USP17L7P0C7H9 530 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 KRT13P13646 458 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms