RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 DEC1Q9P2X7 70 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 SFMBT1Q9UHJ3 866 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 CYTH4Q9UIA0 394 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 AGO1Q9UL18 857 aaKnown RBP13.5□□□□□ -0.25
HDAC1-209ENST00000484305 STRIP2Q9ULQ0 834 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 ZNF510Q9Y2H8 683 aa13.5□□□□□ -0.25
HDAC1-209ENST00000484305 RALGAPA1Q6GYQ0 2036 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 THAP12O43422 761 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 MED7O43513 233 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 CACNG3O60359 315 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 GNA15P30679 374 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 CNR2P34972 360 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 TIE1P35590 1138 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 TNFRSF4P43489 277 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 RPL34P49207 117 aaKnown RBP13.49□□□□□ -0.25
HDAC1-209ENST00000484305 MRPS21P82921 87 aaKnown RBP13.49□□□□□ -0.25
HDAC1-209ENST00000484305 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 SIM2Q14190 667 aaPredicted RBP13.49□□□□□ -0.25
HDAC1-209ENST00000484305 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 DPY19L2P1Q6NXN4 242 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 PRR23BQ6ZRT6 265 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 SCUBE3Q8IX30 993 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 ALLCQ8N6M5 410 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 IL17RCQ8NAC3 791 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 IRGQQ8WZA9 623 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 PLD4Q96BZ4 506 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 DCLK3Q9C098 648 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 MIS12Q9H081 205 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 ST7Q9NRC1 585 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 DNAJC17Q9NVM6 304 aaKnown RBP13.49□□□□□ -0.25
HDAC1-209ENST00000484305 WDR35Q9P2L0 1181 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 NCDNQ9UBB6 729 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 DNAJC12Q9UKB3 198 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 MMP17Q9ULZ9 603 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 NFE2L3Q9Y4A8 694 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
HDAC1-209ENST00000484305 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 FOXN3O00409 490 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 MSI1O43347 362 aaKnown RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 KLF8O95600 359 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 LTFP02788 710 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 CHKAP35790 457 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 TRIP4Q15650 581 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 MEA1Q16626 185 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 C10orf76Q5T2E6 689 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 GRAMD4Q6IC98 578 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 C11orf57Q6ZUT1 292 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 TOGARAM2Q6ZUX3 1019 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 KIAA2013Q8IYS2 634 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 TXNDC5Q8NBS9 432 aaKnown RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 XPO6Q96QU8 1125 aaKnown RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 HCN2Q9UL51 889 aa13.48□□□□□ -0.25
HDAC1-209ENST00000484305 HBS1LQ9Y450 684 aaKnown RBP13.48□□□□□ -0.25
HDAC1-209ENST00000484305 SPTBN4Q9H254 2564 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 SGK1O00141 431 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 AXIN1O15169 862 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 ADAM23O75077 832 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 FBXO21O94952 628 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 APBB3O95704 486 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 PENKP01210 267 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-209ENST00000484305 FYNP06241 537 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 CISD3P0C7P0 127 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 PNMA6AP0CW24 399 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-209ENST00000484305 HNRNPLP14866 589 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDAC1-209ENST00000484305 EEF1GP26641 437 aaKnown RBP13.47□□□□□ -0.25
HDAC1-209ENST00000484305 CLCN1P35523 988 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 CRY1Q16526 586 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-209ENST00000484305 CDKAL1Q5VV42 579 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 FYB2Q5VWT5 728 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 LAIR1Q6GTX8 287 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 TMEM92Q6UXU6 159 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 CEP68Q76N32 757 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 WDTC1Q8N5D0 677 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 TSTD1Q8NFU3 115 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 STK32AQ8WU08 396 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 GAB3Q8WWW8 586 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 TAB2Q9NYJ8 693 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 FBXO10Q9UK96 956 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 RAB23Q9ULC3 237 aa13.47□□□□□ -0.25
HDAC1-209ENST00000484305 PRRT4C9JH25 899 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 E5RJQ4 531 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 PAPSS1O43252 624 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-209ENST00000484305 RPP40O75818 363 aaKnown RBP13.46□□□□□ -0.25
HDAC1-209ENST00000484305 MBD3O95983 291 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 ACADSBP45954 432 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 HARS2P49590 506 aaKnown RBP13.46□□□□□ -0.25
HDAC1-209ENST00000484305 DGKGP49619 791 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 DGKEP52429 567 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 HSF5Q4G112 596 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-209ENST00000484305 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 NUDT18Q6ZVK8 323 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms