RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 Q9H521 79 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 MAN1C1Q9NR34 630 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 PARVAQ9NVD7 372 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 N6AMT1Q9Y5N5 214 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ARID2Q68CP9 1835 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 TMX2-CTNND1H3BSU7 103 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 TLR3O15455 904 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM58BPP0C7Q3 252 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 ZNF12P17014 697 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 CPOXP36551 454 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 NUP107P57740 925 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 RAB15P59190 212 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 MRPS9P82933 396 aaKnown RBP11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 ARHGAP8P85298 464 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 ZACNQ401N2 412 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 WDR44Q5JSH3 913 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 C6orf52Q5T4I8 152 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 NANOGP8Q6NSW7 305 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 GSDMBQ8TAX9 411 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 FEZF2Q8TBJ5 459 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 PLEKHA8Q96JA3 519 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 CEP44Q9C0F1 390 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 CNTN6Q9UQ52 1028 aa11.96□□□□□ -0.49
SEC61A1-205ENST00000483956 WDR64B1ANS9 1081 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 H3BNX3 289 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 XPO1O14980 1071 aaKnown RBP11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 TBC1D12O60347 775 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 TGDSO95455 350 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 ZSCAN5DPP0CG00 497 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 SFNP31947 248 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 PTGER2P43116 358 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 ALDH18A1P54886 795 aaKnown RBP11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 PRKD1Q15139 912 aaPredicted RBP11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 USP41Q3LFD5 358 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 PLA2G4FQ68DD2 849 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 SPOPLQ6IQ16 392 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 DCLRE1AQ6PJP8 1040 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 MZB1Q8WU39 189 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 BSNDQ8WZ55 320 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 ZNF512Q96ME7 567 aaPredicted RBP11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 RANBP9Q96S59 729 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 VPS11Q9H270 941 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 VPS51Q9UID3 782 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 RABL2BQ9UNT1 228 aa11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.5
SEC61A1-205ENST00000483956 SOBPA7XYQ1 873 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 KRT10P13645 584 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 TCEA1P23193 301 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 GPX6P59796 221 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 PDIA2Q13087 525 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 UBAP2LQ14157 1087 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 NIPAL1Q6NVV3 410 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 MFSD7Q6UXD7 560 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 PCGF5Q86SE9 256 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 CLEC4DQ8WXI8 215 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 BORCS5Q969J3 196 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 USTQ9Y2C2 406 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 CLUHO75153 1309 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 WDR81Q562E7 1941 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 HLA-DRAP01903 254 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 KRT1P04264 644 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 GJC1P36383 396 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 C21orf59P57076 290 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 YWHAGP61981 247 aaKnown RBP eCLIP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 HIF1AQ16665 826 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 ARL13BQ3SXY8 428 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 SPOCD1Q6ZMY3 1216 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 MCF2L2Q86YR7 1114 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 TRIML2Q8N7C3 387 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 HSPH1Q92598 858 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 TTC17Q96AE7 1141 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 ACSS3Q9H6R3 686 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 SIAEQ9HAT2 523 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 GIN1Q9NXP7 522 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.95□□□□□ -0.59e-9■■■□□ 15.4
SEC61A1-205ENST00000483956 SCHIP1Q9P0W5 487 aaPredicted RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 SOX13Q9UN79 622 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 hCG_1818297A0A087WSY0 165 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 IQCA1LA6NCM1 817 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 TMEM191CA6NGB0 347 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 EXTL3O43909 919 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 C4BPAP04003 597 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 CFHP08603 1231 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 ETS1P14921 441 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 ENDOUP21128 410 aaKnown RBP11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 GLRA2P23416 452 aa11.95□□□□□ -0.5
SEC61A1-205ENST00000483956 GNA15P30679 374 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms