RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 HSP90AB4PQ58FF6 505 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 FBXO47Q5MNV8 452 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 FAM102BQ5T8I3 360 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 PIK3R6Q5UE93 754 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 NAIF1Q69YI7 327 aaPredicted RBP4.07□□□□□ -1.76
LRCH3-217ENST00000483442 RSPH3Q86UC2 560 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 TRMT2AQ8IZ69 625 aaKnown RBP4.07□□□□□ -1.76
LRCH3-217ENST00000483442 PIK3C3Q8NEB9 887 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 DNAJB3Q8WWF6 145 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 ATRIPQ8WXE1 791 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 RSAD2Q8WXG1 361 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 ST8SIA2Q92186 375 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 MRPS27Q92552 414 aaKnown RBP4.07□□□□□ -1.76
LRCH3-217ENST00000483442 CASP10Q92851 521 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 SECISBP2LQ93073 1101 aaKnown RBP4.07□□□□□ -1.76
LRCH3-217ENST00000483442 CPEB1Q9BZB8 566 aaKnown RBP4.07□□□□□ -1.76
LRCH3-217ENST00000483442 CPVLQ9H3G5 476 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 POFUT1Q9H488 388 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 MTG2Q9H4K7 406 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 PCIF1Q9H4Z3 704 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 TBC1D17Q9HA65 648 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 VAT1LQ9HCJ6 419 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 TOMM22Q9NS69 142 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 WNT16Q9UBV4 365 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 B4GALT6Q9UBX8 382 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 PNMA2Q9UL42 364 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 TMA7Q9Y2S6 64 aaKnown RBP4.07□□□□□ -1.76
LRCH3-217ENST00000483442 CDY2AQ9Y6F7 541 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 ZFHX4Q86UP3 3567 aa4.07□□□□□ -1.76
LRCH3-217ENST00000483442 MYH8P13535 1937 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 AHRRA9YTQ3 701 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CBX4O00257 560 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 PPP1R12AO14974 1030 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 RNF113AO15541 343 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 GPAA1O43292 621 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 DAPK3O43293 454 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 OPHN1O60890 802 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 MFAP3LO75121 409 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 APOL3O95236 402 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 ASLP04424 464 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CYP17A1P05093 508 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 GAAP10253 952 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 HSPD1P10809 573 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 GNAT2P19087 354 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 HOXC8P31273 242 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 SP4Q02446 784 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 KRT17Q04695 432 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CSTF1Q05048 431 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CD69Q07108 199 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 ADCY2Q08462 1091 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 MGAT3Q09327 533 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CSRP2Q16527 193 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 TMEM266Q2M3C6 531 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 RRP12Q5JTH9 1297 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 N4BP2L1Q5TBK1 243 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 XRRA1Q6P2D8 792 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CEP85Q6P2H3 762 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 KCNV1Q6PIU1 500 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 TSHZ1Q6ZSZ6 1077 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 MAML2Q8IZL2 1156 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 SLC44A3Q8N4M1 653 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 MRPL43Q8N983 215 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 COLGALT1Q8NBJ5 622 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CPT1CQ8TCG5 803 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 PROKR1Q8TCW9 393 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 LMBR1Q8WVP7 490 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 VOPP1Q96AW1 172 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 ARL8AQ96BM9 186 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 ZBTB10Q96DT7 871 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 KIF1BPQ96EK5 621 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 TMEM47Q9BQJ4 181 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 NACAP1Q9BZK3 213 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 FAM49AQ9H0Q0 323 aaPredicted RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 NAPBQ9H115 298 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 ZMAT4Q9H898 229 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 PXMP2Q9NR77 195 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 ANGPTL2Q9UKU9 493 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 PADI3Q9ULW8 664 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 DUSP12Q9UNI6 340 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 NLRC5Q86WI3 1866 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 MAP1BP46821 2468 aaKnown RBP4.06□□□□□ -1.76
LRCH3-217ENST00000483442 PKD1L2Q7Z442 2459 aa4.06□□□□□ -1.76
LRCH3-217ENST00000483442 CEP250Q9BV73 2442 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 DMDP11532 3685 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 NRCAMQ92823 1304 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 GOLGA6L6A8MZA4 724 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 NT5C1B-RDH14C9J2C7 533 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 HOXA3O43365 443 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 OPA1O60313 960 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PPFIA2O75334 1257 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PROS1P07225 676 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 TGFB3P10600 412 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PDHBP11177 359 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 TOP1P11387 765 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 GLULP15104 373 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 EPCAMP16422 314 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 UBA1P22314 1058 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 MARK3P27448 753 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms