RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 VN1R2Q8NFZ6 395 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 ACSF2Q96CM8 615 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-205ENST00000482968 CDCA3Q99618 268 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-205ENST00000482968 NCAPGQ9BPX3 1015 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 LRRC3Q9BY71 257 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 IL21Q9HBE4 155 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 KLHL11Q9NVR0 708 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 MSI1O43347 362 aaKnown RBP15.65■□□□□ 0.1
PHGDH-205ENST00000482968 F9P00740 461 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 HNRNPA1P09651 372 aaKnown RBP eCLIP15.65■□□□□ 0.1
PHGDH-205ENST00000482968 PRLRP16471 622 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 HOXA9P31269 272 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 ZNF211Q13398 564 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-205ENST00000482968 KCNC3Q14003 757 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 HECTD3Q5T447 861 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 LRRC38Q5VT99 294 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 GAREM2Q75VX8 874 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.19e-8■■■■□ 22.2
PHGDH-205ENST00000482968 MIB1Q86YT6 1006 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 TMC8Q8IU68 726 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 HSPH1Q92598 858 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 RNF34Q969K3 372 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 PGAP3Q96FM1 320 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-205ENST00000482968 PRKD2Q9BZL6 878 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 SMOC2Q9H3U7 446 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 ASAH2Q9NR71 780 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
PHGDH-205ENST00000482968 ZDHHC7Q9NXF8 308 aa15.65■□□□□ 0.1
PHGDH-205ENST00000482968 DNMT3BQ9UBC3 853 aaKnown RBP15.65■□□□□ 0.1
PHGDH-205ENST00000482968 C2orf78A6NCI8 922 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 SOX1O00570 391 aaPredicted RBP15.64■□□□□ 0.1
PHGDH-205ENST00000482968 XYLBO75191 536 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 IGLV3-25P01717 112 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 KRT7P08729 469 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 RARAP10276 462 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 PYGMP11217 842 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 GJA1P17302 382 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 TCP1P17987 556 aaKnown RBP15.64■□□□□ 0.1
PHGDH-205ENST00000482968 ATP5C1P36542 298 aaKnown RBP15.64■□□□□ 0.1
PHGDH-205ENST00000482968 HYAL1Q12794 435 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 DCAF12L1Q5VU92 463 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 MSANTD2Q6P1R3 559 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 CYP4V2Q6ZWL3 525 aaPredicted RBP15.64■□□□□ 0.1
PHGDH-205ENST00000482968 CCDC185Q8N715 623 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 CAPZA3Q96KX2 299 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 FAM161BQ96MY7 647 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 NACA2Q9H009 215 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 ATXN3LQ9H3M9 355 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 WDCPQ9H6R7 721 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 WDR6Q9NNW5 1121 aaKnown RBP15.64■□□□□ 0.1
PHGDH-205ENST00000482968 MARCH2Q9P0N8 246 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 RASAL2Q9UJF2 1139 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 PRDM4Q9UKN5 801 aa15.64■□□□□ 0.1
PHGDH-205ENST00000482968 ANAPC1Q9H1A4 1944 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 A0A1W2PRU2 124 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 IRAK2O43187 625 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 COCHO43405 550 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 ZRANB2O95218 330 aaKnown RBP eCLIP15.64■□□□□ 0.09
PHGDH-205ENST00000482968 EIF4EBP2Q13542 120 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-205ENST00000482968 LLGL1Q15334 1064 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 BOLA3Q53S33 107 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 ODF2Q5BJF6 829 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 ERMARDQ5T6L9 678 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 TXNDC8Q6A555 127 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 AADACL2Q6P093 401 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 TMC5Q6UXY8 1006 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 POLNQ7Z5Q5 900 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 GRASPQ7Z6J2 395 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-205ENST00000482968 TSC1Q92574 1164 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 RNF25Q96BH1 459 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-205ENST00000482968 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 MS4A14Q96JA4 679 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 SERPINB11Q96P15 392 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 CYP2S1Q96SQ9 504 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 CDK5RAP1Q96SZ6 601 aaKnown RBP15.64■□□□□ 0.09
PHGDH-205ENST00000482968 MAGEB5Q9BZ81 275 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 RNF38Q9H0F5 515 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 PIDD1Q9HB75 910 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 TRPC7Q9HCX4 862 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 TMPRSS4Q9NRS4 437 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 GPATCH2LQ9NWQ4 482 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 DNMT3LQ9UJW3 386 aa15.64■□□□□ 0.09
PHGDH-205ENST00000482968 TMEM265A0A087WTH1 108 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 PI4K2BG5E9Z4 385 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 LINC01565O15544 149 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 CEP104O60308 925 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 RHOP08100 348 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 CXCR3P49682 368 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 NTHL1P78549 312 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 CYP4F8P98187 520 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 ZC3H12AQ5D1E8 599 aaKnown RBP15.63■□□□□ 0.09
PHGDH-205ENST00000482968 PDZD4Q76G19 769 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-205ENST00000482968 TADA2BQ86TJ2 420 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 KATNAL2Q8IYT4 538 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 ZNF276Q8N554 614 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 KCTD6Q8NC69 237 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 RAPGEF5Q92565 580 aa15.63■□□□□ 0.09
PHGDH-205ENST00000482968 MRPS31Q92665 395 aaKnown RBP15.63■□□□□ 0.09
PHGDH-205ENST00000482968 ZNF707Q96C28 371 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms