RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SAYSD1Q9NPB0 183 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 PAK5Q9P286 719 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 LGALS13Q9UHV8 139 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 TIMM13Q9Y5L4 95 aaPredicted RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 TBKBP1A7MCY6 615 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 L1CAMP32004 1257 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 RPL22P35268 128 aaKnown RBP16.37■□□□□ 0.21
RXRA-202ENST00000481739 BRCC3P46736 316 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 NR1H3Q13133 447 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 RASA2Q15283 850 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 MAPRE1Q15691 268 aaKnown RBP16.37■□□□□ 0.21
RXRA-202ENST00000481739 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 PQLC3Q8N755 202 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 CLEC4CQ8WTT0 213 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 CPT1BQ92523 772 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 FAM149B1Q96BN6 582 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 TRIM62Q9BVG3 475 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 NRDE2Q9H7Z3 1164 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 POPDC2Q9HBU9 364 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 CRTAC1Q9NQ79 661 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 PCDH10Q9P2E7 1040 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 PRKAG2Q9UGJ0 569 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 FETUBQ9UGM5 382 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 PRG3Q9Y2Y8 225 aaPredicted RBP16.37■□□□□ 0.21
RXRA-202ENST00000481739 ACTL7BQ9Y614 415 aa16.37■□□□□ 0.21
RXRA-202ENST00000481739 MKI67P46013 3256 aaKnown RBP16.36■□□□□ 0.21
RXRA-202ENST00000481739 E7ESA3 106 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 E7EVH7 732 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 H7C0C1 242 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 M0QZQ0 153 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 B4GALT3O60512 393 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 ATP2C2O75185 946 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 ETS1P14921 441 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 ACAT1P24752 427 aaKnown RBP16.36■□□□□ 0.21
RXRA-202ENST00000481739 CYP2F1P24903 491 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 ARL4AP40617 200 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 ATP5OP48047 213 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 GDF10P55107 478 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 HNRNPH2P55795 449 aaKnown RBP16.36■□□□□ 0.21
RXRA-202ENST00000481739 ZC3H12AQ5D1E8 599 aaKnown RBP16.36■□□□□ 0.21
RXRA-202ENST00000481739 PRUNE1Q86TP1 453 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 SPATS2Q86XZ4 545 aaKnown RBP16.36■□□□□ 0.21
RXRA-202ENST00000481739 TDRPQ86YL5 185 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 UNC45BQ8IWX7 931 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 COLGALT2Q8IYK4 626 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 DEFB106AQ8N104 65 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 FAM71DQ8N9W8 422 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 PCDH19Q8TAB3 1148 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 PNPLA8Q9NP80 782 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 DNAJB4Q9UDY4 337 aa16.36■□□□□ 0.21
RXRA-202ENST00000481739 SF3B1O75533 1304 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■■■■■ 140.1
RXRA-202ENST00000481739 F8W810 466 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 CHADO15335 359 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 AP1G2O75843 785 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 ACRP10323 421 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 PHBP35232 272 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 SULT1E1P49888 294 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 DSC1Q08554 894 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 RAB41Q5JT25 222 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 PDIK1LQ8N165 341 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 SCML4Q8N228 414 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 UHMK1Q8TAS1 419 aaKnown RBP16.35■□□□□ 0.21
RXRA-202ENST00000481739 IRGQQ8WZA9 623 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 PCED1BQ96HM7 432 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 NPY6RQ99463 290 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 MRPL9Q9BYD2 267 aaKnown RBP16.35■□□□□ 0.21
RXRA-202ENST00000481739 DHX35Q9H5Z1 703 aaKnown RBP16.35■□□□□ 0.21
RXRA-202ENST00000481739 CSNK1G1Q9HCP0 422 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 ABHD14A-ACY1A0A1B0GW23 586 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 CLDN5O00501 218 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 ZBED1O96006 694 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 ITGB1P05556 798 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 TYMPP19971 482 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 TKTL1P51854 596 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 ZNF135P52742 658 aaPredicted RBP16.35■□□□□ 0.21
RXRA-202ENST00000481739 LONRF1Q17RB8 773 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 RAB6CQ53S08 254 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 DCAF6Q58WW2 860 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
RXRA-202ENST00000481739 KIAA0319Q5VV43 1072 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 ATP11CQ8NB49 1132 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 RSPH1Q8WYR4 309 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 VWCEQ96DN2 955 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 C9orf72Q96LT7 481 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 RAB6CQ9H0N0 254 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
RXRA-202ENST00000481739 GPATCH2LQ9NWQ4 482 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 FZD10Q9ULW2 581 aa16.35■□□□□ 0.21
RXRA-202ENST00000481739 HACD1B0YJ81 288 aa16.34■□□□□ 0.21
RXRA-202ENST00000481739 NDUFAB1O14561 156 aa16.34■□□□□ 0.21
RXRA-202ENST00000481739 TRAPPC3O43617 180 aa16.34■□□□□ 0.21
RXRA-202ENST00000481739 TADA2AO75478 443 aa16.34■□□□□ 0.21
RXRA-202ENST00000481739 FAM107AO95990 144 aa16.34■□□□□ 0.21
RXRA-202ENST00000481739 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
RXRA-202ENST00000481739 SLCO1A2P46721 670 aa16.34■□□□□ 0.21
RXRA-202ENST00000481739 MAP3K7CLP57077 242 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms