RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 TMEM196Q5HYL7 178 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 LY6G5CQ5SRR4 150 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 BTBD8Q5XKL5 378 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPRF-213ENST00000481019 ARHGAP18Q8N392 663 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 CPA6Q8N4T0 437 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 CCDC112Q8NEF3 446 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 IRGQQ8WZA9 623 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 PCDHB18PQ96TA0 734 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 LHX5Q9H2C1 402 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 MARCH2Q9P0N8 246 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 NAALADL1Q9UQQ1 740 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 SH3BP1Q9Y3L3 701 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 USP34Q70CQ2 3546 aa12.79□□□□□ -0.36
PTPRF-213ENST00000481019 AKR1B15C9JRZ8 316 aaPredicted RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 H0Y858 1186 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 FBXO21O94952 628 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 CORO1AP31146 461 aaKnown RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 CDH5P33151 784 aaPredicted RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 KRT9P35527 623 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 PBX1P40424 430 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 FMO1Q01740 532 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 MTAPQ13126 283 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 CCINQ13939 588 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 MSANTD2Q6P1R3 559 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 FAM183BPQ6ZVS7 135 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 ADAM32Q8TC27 787 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 BAP1Q92560 729 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 PPP1R13BQ96KQ4 1090 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 ABCC13Q9NSE7 274 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 FAM86C1Q9NVL1 165 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 ZNHIT6Q9NWK9 470 aaKnown RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 AGO1Q9UL18 857 aaKnown RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
PTPRF-213ENST00000481019 HCN4Q9Y3Q4 1203 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 KIAA1549LQ6ZVL6 1849 aa12.78□□□□□ -0.36
PTPRF-213ENST00000481019 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.36
PTPRF-213ENST00000481019 A0A1W2PQJ5 194 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 GRAP2O75791 330 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 NFATC1O95644 943 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 ADH5P11766 374 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 STAT1P42224 750 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 ACADSBP45954 432 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 RPS9P46781 194 aaKnown RBP12.77□□□□□ -0.37
PTPRF-213ENST00000481019 BPIFB4P59827 614 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 NOMO3P69849 1222 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 ARID5AQ03989 594 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
PTPRF-213ENST00000481019 OLFML1Q6UWY5 402 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 TAC4Q86UU9 113 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 DENND1CQ8IV53 801 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 NAT16Q8N8M0 369 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
PTPRF-213ENST00000481019 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 MSANTD3Q96H12 275 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 NELL2Q99435 816 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 P2RY13Q9BPV8 354 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 ADAM33Q9BZ11 813 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 CHRDQ9H2X0 955 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 SPHK2Q9NRA0 654 aa12.77□□□□□ -0.37
PTPRF-213ENST00000481019 MRPS17Q9Y2R5 130 aaKnown RBP12.77□□□□□ -0.37
PTPRF-213ENST00000481019 SLC9A3R1O14745 358 aaPredicted RBP12.76□□□□□ -0.37
PTPRF-213ENST00000481019 CCDC172P0C7W6 258 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 NCAM1P13591 858 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 COG7P83436 770 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 CDR2Q01850 454 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 TBX2Q13207 712 aaPredicted RBP12.76□□□□□ -0.37
PTPRF-213ENST00000481019 ANGPT1Q15389 498 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 OR6B2Q6IFH4 312 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 TSSK4Q6SA08 328 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 TPGS1Q6ZTW0 290 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 CACNA2D4Q7Z3S7 1137 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 ETFBKMTQ8IXQ9 262 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 RNF139Q8WU17 664 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 CD101Q93033 1021 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 BHMTQ93088 406 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 MYEOVQ96EZ4 313 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 SPAG5Q96R06 1193 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 PANX2Q96RD6 677 aa12.76□□□□□ -0.37
PTPRF-213ENST00000481019 CDK5RAP1Q96SZ6 601 aaKnown RBP12.76□□□□□ -0.37
PTPRF-213ENST00000481019 TTYH3Q9C0H2 523 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms