RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 GABRR2P28476 465 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 GBP1P32455 592 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 RBM10P98175 930 aaKnown RBP17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 DEUP1Q05D60 604 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 RING1Q06587 406 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 SCAPQ12770 1279 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 PPP2R5DQ14738 602 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 HADHQ16836 314 aaKnown RBP17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 BOLA3Q53S33 107 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 BRMS1LQ5PSV4 323 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 KATNAL2Q8IYT4 538 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 FAM71BQ8TC56 605 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 KRT35Q92764 455 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 CARD9Q9H257 536 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 PIGVQ9NUD9 493 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 DDIT4Q9NX09 232 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 ZMYM5Q9UJ78 669 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 TLR6Q9Y2C9 796 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 HBS1LQ9Y450 684 aaKnown RBP17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 NOTCH4Q99466 2003 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 ENC1O14682 589 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 RHOP08100 348 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 ATP5C1P36542 298 aaKnown RBP17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 CCR2P41597 374 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 KPNA1P52294 538 aaPredicted RBP17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 TRIP4Q15650 581 aaPredicted RBP17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 CDO1Q16878 200 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 DAB2IPQ5VWQ8 1189 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 ANKRD54Q6NXT1 300 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 VSIG1Q86XK7 387 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 UBL4BQ8N7F7 174 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 ALG3Q92685 438 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 CORO1BQ9BR76 489 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 CCSER2Q9H7U1 834 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 HCFC1R1Q9NWW0 138 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 ARHGEF38Q9NXL2 777 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 DDX56Q9NY93 547 aaKnown RBP17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 DNMT3LQ9UJW3 386 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 PACSIN2Q9UNF0 486 aaPredicted RBP17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 USTQ9Y2C2 406 aa17.53■□□□□ 0.4
SCAMP3-207ENST00000480219 ZNF487B1APH4 448 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 ZNF197O14709 1029 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 COCHO43405 550 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 PRPSAP2O60256 369 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 TCP1P17987 556 aaKnown RBP17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 MARCKSL1P49006 195 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 ARSEP51690 589 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 MTA1Q13330 715 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 TAZQ16635 292 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 C10orf120Q5SQS8 335 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 TXNRD3NBQ6F5E7 133 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 SYCE2Q6PIF2 218 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 RSRC2Q7L4I2 434 aaKnown RBP17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 GPR149Q86SP6 731 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 EXD1Q8NHP7 514 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 SHKBP1Q8TBC3 707 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 MRPS31Q92665 395 aaKnown RBP17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 LRCH3Q96II8 777 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 GCNAQ96QF7 691 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 FAM204AQ9H8W3 233 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 MARCH2Q9P0N8 246 aa17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCAMP3-207ENST00000480219 KCNU1A8MYU2 1149 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 NRG2O14511 850 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 LINC01565O15544 149 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 TBX18O95935 607 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 RARAP10276 462 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 WEE1P30291 646 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 PTPN7P35236 360 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 ADRA1BP35368 520 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 RWDD2BP57060 319 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 SLC7A9P82251 487 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 TUBB2AQ13885 445 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 DPYSL2Q16555 572 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 DCAF12L1Q5VU92 463 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 PDZD4Q76G19 769 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 SND1Q7KZF4 910 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 FAM131BQ86XD5 332 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 ADAM32Q8TC27 787 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 SMG7Q92540 1137 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 PBKQ96KB5 322 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 ZFRQ96KR1 1074 aaKnown RBP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 FCRL2Q96LA5 508 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 OSBPL9Q96SU4 736 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 TUBB2BQ9BVA1 445 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 CLEC1BQ9P126 229 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 SFMBT1Q9UHJ3 866 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 FZD10Q9ULW2 581 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 SAR1BQ9Y6B6 198 aa17.51■□□□□ 0.39
SCAMP3-207ENST00000480219 A0A1W2PRU2 124 aa17.5■□□□□ 0.39
SCAMP3-207ENST00000480219 C2orf78A6NCI8 922 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms