RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 DNASE1L2Q92874 299 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 HPS3Q969F9 1004 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ELSPBP1Q96BH3 223 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 SAAL1Q96ER3 474 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 C8orf48Q96LL4 319 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ZNF512Q96ME7 567 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 IPO9Q96P70 1041 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 GBP4Q96PP9 640 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TSG101Q99816 390 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 DDX23Q9BUQ8 820 aaKnown RBP5.22□□□□□ -1.57
PTCD3-213ENST00000480102 IMPG2Q9BZV3 1241 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 ELOVL4Q9GZR5 314 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 KIF9Q9HAQ2 790 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 KCNK12Q9HB15 430 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 CSNK1G1Q9HCP0 422 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 CD320Q9NPF0 282 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 TMEM51Q9NW97 253 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 KIAA1257Q9ULG3 409 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 L1RE1Q9UN81 338 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 YIPF1Q9Y548 306 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 PCDHB5Q9Y5E4 795 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 BRWD1Q9NSI6 2320 aa5.22□□□□□ -1.57
PTCD3-213ENST00000480102 GTPBP10A4D1E9 387 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 LRRIQ3A6PVS8 624 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 GOLGA6L22H0YM25 854 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 PRRG1O14668 218 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 VNN2O95498 520 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 MBD3O95983 291 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CST3P01034 146 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 RHOP08100 348 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CSH1P0DML2 217 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CSH2P0DML3 217 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 KRT13P13646 458 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 IBSPP21815 317 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 TBXAS1P24557 533 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 RBM10P98175 930 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ADCY1Q08828 1119 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CETN1Q12798 172 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 TRPC3Q13507 836 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 SEPT6Q14141 434 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 VEPH1Q14D04 833 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 WDR72Q3MJ13 1102 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF667Q5HYK9 610 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 WIPI1Q5MNZ9 446 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 C1orf220Q5T0J3 134 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 RARS2Q5T160 578 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 TDRD10Q5VZ19 366 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 TTI2Q6NXR4 508 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 KLHDC10Q6PID8 442 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ENOSF1Q7L5Y1 443 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 PALB2Q86YC2 1186 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 FAM186BQ8IYM0 893 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 GRAMD1CQ8IYS0 662 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ADGRF2Q8IZF7 708 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 SCML4Q8N228 414 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC150Q8NCX0 1101 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 FBXL13Q8NEE6 735 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 PDZD8Q8NEN9 1154 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 OR10T2Q8NGX3 314 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 HASPINQ8TF76 798 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 NOC3LQ8WTT2 800 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 FGF13Q92913 245 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 SLC35C1Q96A29 364 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ASIC4Q96FT7 647 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 SHDQ96IW2 340 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 B3GALT6Q96L58 329 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 NELL2Q99435 816 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CYP4F11Q9HBI6 524 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ASAH2Q9NR71 780 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 DDX43Q9NXZ2 648 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 CEP72Q9P209 647 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 DNMT3BQ9UBC3 853 aaKnown RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 ARMCX3Q9UH62 379 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-213ENST00000480102 RWDD2AQ9UIY3 292 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 SNX9Q9Y5X1 595 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 PTPRJQ12913 1337 aa5.21□□□□□ -1.58
PTCD3-213ENST00000480102 EVPLQ92817 2033 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PPEF2O14830 753 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CLIC2O15247 247 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CILPO75339 1184 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 SEC24AO95486 1093 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 VNN1O95497 513 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CAVIN2O95810 425 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 OLFM2O95897 454 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 ZDHHC11BP0C7U3 371 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 DLATP10515 647 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 HMGA1P17096 107 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 RPL17P18621 184 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PTMSP20962 102 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 IGFBP6P24592 240 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CASP1P29466 404 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 MXI1P50539 228 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 CYP2J2P51589 502 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 IRAK1P51617 712 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 STARD6P59095 220 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 YWHAEP62258 255 aaKnown RBP5.2□□□□□ -1.58
PTCD3-213ENST00000480102 TNNC1P63316 161 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 FANCCQ00597 558 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 DUSP4Q13115 394 aa5.2□□□□□ -1.58
PTCD3-213ENST00000480102 PAK1Q13153 545 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms