RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 PROSER3Q2NL68 480 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 TRIM71Q2Q1W2 868 aaKnown RBP6.28□□□□□ -1.4
CCDC58-204ENST00000479414 ZACNQ401N2 412 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 CCDC38Q502W7 563 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 TMEM196Q5HYL7 178 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 ZNF788Q6ZQV5 615 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 PTF1AQ7RTS3 328 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 CACNA2D3Q8IZS8 1091 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 MYCT1Q8N699 235 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 C12orf76Q8N812 135 aaPredicted RBP6.28□□□□□ -1.4
CCDC58-204ENST00000479414 OVCA2Q8WZ82 227 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 RMDN3Q96TC7 470 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 EPS8L2Q9H6S3 715 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 BTBD19C9JJ37 291 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 POC1B-GALNT4F8VUJ3 575 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 H3BNC9 293 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 CA12O43570 354 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 USP1O94782 785 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 NHLRC4P0CG21 123 aaPredicted RBP6.27□□□□□ -1.41
CCDC58-204ENST00000479414 DRD1P21728 446 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 COPB1P53618 953 aaKnown RBP6.27□□□□□ -1.41
CCDC58-204ENST00000479414 GPC5P78333 572 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 PTK2BQ14289 1009 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 DHX8Q14562 1220 aaKnown RBP6.27□□□□□ -1.41
CCDC58-204ENST00000479414 ANO1Q5XXA6 986 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 GALNT4Q8N4A0 578 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 SEMA6DQ8NFY4 1073 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 FAM71BQ8TC56 605 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 KAZALD1Q96I82 304 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 FYTTD1Q96QD9 318 aaKnown RBP6.27□□□□□ -1.41
CCDC58-204ENST00000479414 CHMP4AQ9BY43 222 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 MAGEH1Q9H213 219 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 VPS45Q9NRW7 570 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 LRFN1Q9P244 771 aa6.27□□□□□ -1.41
CCDC58-204ENST00000479414 MORC2Q9Y6X9 1032 aaPredicted RBP6.27□□□□□ -1.41
CCDC58-204ENST00000479414 WIPF3A6NGB9 483 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 LINC01548A6NM66 108 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 TISP43B9A030 160 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 J3KTA2 159 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 SYT5O00445 386 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 PPFIA2O75334 1257 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 SKAP2O75563 359 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 ITGA5P08648 1049 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 CHRM5P08912 532 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 TMIGD3P0DMS9 266 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 GYS1P13807 737 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 ZNF37AP17032 561 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 KLRK1P26718 216 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 SERPINF1P36955 418 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 HALP42357 657 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 BLMHQ13867 455 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 PIK3AP1Q6ZUJ8 805 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 P3H2Q8IVL5 708 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 SMC5Q8IY18 1101 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 NKAPQ8N5F7 415 aaKnown RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 MAFAQ8NHW3 353 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 ADAMTS18Q8TE60 1221 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 ZNF764Q96H86 408 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 RITA1Q96K30 269 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 PRPF18Q99633 342 aaKnown RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 CINPQ9BW66 212 aaPredicted RBP6.26□□□□□ -1.41
CCDC58-204ENST00000479414 SAP30LQ9HAJ7 183 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 FZD4Q9ULV1 537 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 PCDHGB3Q9Y5G1 929 aa6.26□□□□□ -1.41
CCDC58-204ENST00000479414 LOC102724159A0A0B4J2E5 919 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 GXYLT2A0PJZ3 443 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 SMIM22K7EJ46 135 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PRAMEF2O60811 474 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 RBMXL2O75526 392 aaKnown RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 MBPP02686 304 aaPredicted RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PRKCGP05129 697 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 ANXA6P08133 673 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 ATF7P17544 494 aaPredicted RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 MMP8P22894 467 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PNLIPRP1P54315 467 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 TUBA4AP68366 448 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 CCDC15Q0P6D6 951 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 GRM4Q14833 912 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 LARS2Q15031 903 aaKnown RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PWP2Q15269 919 aaKnown RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 FAM187BQ17R55 369 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 INO80DQ53TQ3 878 aaPredicted RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PRAMEF17Q5VTA0 474 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 CCDC144NLQ6NUI1 221 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 JMJD6Q6NYC1 403 aaPredicted RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 SERPINA13PQ6UXR4 307 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 TTC30AQ86WT1 665 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 CHSY1Q86X52 802 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 GATAD2AQ86YP4 633 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 SUGP1Q8IWZ8 645 aaKnown RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 FAM71DQ8N9W8 422 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 MCRS1Q96EZ8 462 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PRR11Q96HE9 360 aaPredicted RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 SORBS1Q9BX66 1292 aaKnown RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 TP63Q9H3D4 680 aaPredicted RBP6.25□□□□□ -1.41
CCDC58-204ENST00000479414 USP29Q9HBJ7 922 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 SEMA5BQ9P283 1151 aa6.25□□□□□ -1.41
CCDC58-204ENST00000479414 PTGFRNQ9P2B2 879 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms