RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 ARSHQ5FYA8 562 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 RNF111Q6ZNA4 994 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 EEPD1Q7L9B9 569 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 TLK2Q86UE8 772 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 FBXO11Q86XK2 927 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 LZTR1Q8N653 840 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 ZNF564Q8TBZ8 553 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 EFHD2Q96C19 240 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 C7orf26Q96N11 449 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 UNKQ9C0B0 810 aaKnown RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 AP5M1Q9H0R1 490 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 CCDC68Q9H2F9 335 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 PPARGC1AQ9UBK2 798 aaKnown RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 SOX1O00570 391 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 KIAA0355O15063 1070 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 ADAM23O75077 832 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 CYP1A2P05177 515 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 CLTBP09497 229 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 SRGAP2BP0DMP2 458 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 ATP6V1B1P15313 513 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 AOC1P19801 751 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 CPOXP36551 454 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 ZNF200P98182 395 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 MYBPC1Q00872 1141 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 TRIP13Q15645 432 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 TMEM132AQ24JP5 1023 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 KLHL38Q2WGJ6 581 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 DUSP28Q4G0W2 176 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 MCF2L2Q86YR7 1114 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 SLC25A41Q8N5S1 370 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 RIN3Q8TB24 985 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 STARD8Q92502 1023 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 PWWP2AQ96N64 755 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 CCDC106Q9BWC9 280 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 DRC3Q9H069 523 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 VAT1LQ9HCJ6 419 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 TRIOBPQ9H2D6 2365 aa13.61□□□□□ -0.23
CNKSR3-204ENST00000479339 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 LTBP2Q14767 1821 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 ARHGAP42A6NI28 874 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 H3BSA7 217 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 CABYRO75952 493 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 RAG1P15918 1043 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 NFKBIAP25963 317 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 FMO5P49326 533 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 KCNC4Q03721 635 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 KDSRQ06136 332 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 FSCN1Q16658 493 aaKnown RBP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 ZNF829Q3KNS6 432 aaPredicted RBP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 DCDC5Q6ZRR9 648 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 LPCAT2Q7L5N7 544 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 PRPF39Q86UA1 669 aaKnown RBP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 ALYREFQ86V81 257 aaKnown RBP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 PALB2Q86YC2 1186 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 DDHD1Q8NEL9 900 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 FBXO27Q8NI29 283 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 PRPF18Q99633 342 aaKnown RBP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 NEURL2Q9BR09 285 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 HGH1Q9BTY7 390 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 AMNQ9BXJ7 453 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 NUF2Q9BZD4 464 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 INTS2Q9H0H0 1204 aaKnown RBP13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 GTF3C4Q9UKN8 822 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 INPP5FQ9Y2H2 1132 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
CNKSR3-204ENST00000479339 I3L4J1 428 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 ALOX15BO15296 676 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 DYNC1LI2O43237 492 aaPredicted RBP13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 SLC37A4O43826 429 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 CNOT3O75175 753 aaKnown RBP13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 SERPINA6P08185 405 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 CDH3P22223 829 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 SERPINB6P35237 376 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 PSMC2P35998 433 aaKnown RBP13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 ALDH3B2P48448 385 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 ENTPD1P49961 510 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 BEX3Q00994 111 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 GHRHRQ02643 423 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 ECM1Q16610 540 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 SLC35G1Q2M3R5 365 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 ADGRD1Q6QNK2 874 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 TTC13Q8NBP0 860 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 PPP1R14CQ8TAE6 165 aa13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 SYTL5Q8TDW5 730 aaPredicted RBP13.59□□□□□ -0.23
CNKSR3-204ENST00000479339 SREK1Q8WXA9 508 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms