RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 SPARCL1Q14515 664 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 FBXO46Q6PJ61 603 aaPredicted RBP12.43□□□□□ -0.42
PCCB-214ENST00000478469 TTC8Q8TAM2 541 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCCB-214ENST00000478469 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
PCCB-214ENST00000478469 GPC4O75487 556 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 TRIM60Q495X7 471 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 RASSF3Q86WH2 238 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 CREG2Q8IUH2 290 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 FBXO25Q8TCJ0 367 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 UCMAQ8WVF2 138 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 TFAP2BQ92481 460 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 IGFLR1Q9H665 355 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 SLC28A3Q9HAS3 691 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 MOSPD1Q9UJG1 213 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 VANGL2Q9ULK5 521 aa12.43□□□□□ -0.42
PCCB-214ENST00000478469 AAR2Q9Y312 384 aaKnown RBP12.43□□□□□ -0.42
PCCB-214ENST00000478469 TMEM191CA6NGB0 347 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 E5RI56 91 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 ZNF263O14978 683 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 APOC2P02655 101 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 RARGP13631 454 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 TYMPP19971 482 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 NR2C2P49116 596 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 NUMBP49757 651 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 UGP2Q16851 508 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 TIGD5Q53EQ6 642 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 RSPH1Q8WYR4 309 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 TTC17Q96AE7 1141 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 TMA16Q96EY4 203 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 HNRNPABQ99729 332 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 SNRNP25Q9BV90 132 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 ASAH2Q9NR71 780 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 SLC30A1Q9Y6M5 507 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 COL4A1P02462 1669 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 MYBPHLA2RUH7 354 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 CBX4O00257 560 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 KIF3CO14782 793 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 SH3BP5O60239 455 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 COL6A1P12109 1028 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 KCNE1P15382 129 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 ATP13A4Q4VNC1 1196 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 PLEKHA7Q6IQ23 1121 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 LLGL2Q6P1M3 1020 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 DCLK2Q8N568 766 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 JOSD2Q8TAC2 188 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 PLEKHO2Q8TD55 490 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 FIZ1Q96SL8 496 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 SARS2Q9NP81 518 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 RBM22Q9NW64 420 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCCB-214ENST00000478469 CNTN3Q9P232 1028 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 SUN1O94901 812 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 LPIN1Q14693 890 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 RETSATQ6NUM9 610 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 LGI2Q8N0V4 545 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 CASKIN2Q8WXE0 1202 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 PCDH9Q9HC56 1237 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 NOCTQ9UK39 431 aaKnown RBP12.42□□□□□ -0.42
PCCB-214ENST00000478469 MYH11P35749 1972 aa12.42□□□□□ -0.42
PCCB-214ENST00000478469 ABHD14A-ACY1A0A1B0GW23 586 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 TLR5O60602 858 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 GLUD1P00367 558 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 PCK1P35558 622 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 MARC1Q5VT66 337 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 POLNQ7Z5Q5 900 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
PCCB-214ENST00000478469 PCED1BQ96HM7 432 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 CORO1BQ9BR76 489 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 SENP1Q9P0U3 644 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 RREB1Q92766 1687 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 ERBB2P04626 1255 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 WARSP23381 471 aaKnown RBP12.41□□□□□ -0.42
PCCB-214ENST00000478469 LMO2P25791 158 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 ARHGEF7Q14155 803 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 WDR93Q6P2C0 686 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 KCNT2Q6UVM3 1135 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 KAT2BQ92831 832 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 STAMBPL1Q96FJ0 436 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 ATXN7L3BQ96GX2 97 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 OXCT2Q9BYC2 517 aaPredicted RBP12.41□□□□□ -0.42
PCCB-214ENST00000478469 UBXN6Q9BZV1 441 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 PDLIM7Q9NR12 457 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 WHRNQ9P202 907 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 KCNK1O00180 336 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 TSPAN3O60637 253 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 ASPAP45381 313 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 RENBPP51606 427 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 PMF1Q6P1K2 205 aa12.41□□□□□ -0.42
PCCB-214ENST00000478469 CNKSR3Q6P9H4 555 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms