RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 YBX3P16989 372 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 CSE1LP55060 971 aaKnown RBP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 MGAT5Q09328 741 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 ZCWPW2Q504Y3 356 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 PRPF39Q86UA1 669 aaKnown RBP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 VPS28Q9UK41 221 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 SNCAIPQ9Y6H5 919 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 KCPQ6ZWJ8 1503 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 STMN1P16949 149 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TPH1P17752 444 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 AGAP9Q5VTM2 703 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 DDI1Q8WTU0 396 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 ALG3Q92685 438 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 CAMKK2Q96RR4 588 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TLR8Q9NR97 1041 aaKnown RBP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 FAF1Q9UNN5 650 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 RNF103O00237 685 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 CBX4O00257 560 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 APOA4P06727 396 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TUBP50607 506 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 POLE2P56282 527 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TBX4P57082 545 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 RRP1BQ14684 758 aaKnown RBP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 POLD3Q15054 466 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 SYTL3Q4VX76 610 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 ILDR2Q71H61 639 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 HS6ST3Q8IZP7 471 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 MAGEB18Q96M61 343 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 KCNK16Q96T55 309 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TRIM4Q9C037 500 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 ING2Q9H160 280 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 SMPD4Q9NXE4 827 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 BTBD7Q9P203 1132 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 DCDC2Q9UHG0 476 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TRIM17Q9Y577 477 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 BTNL10A8MVZ5 291 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 IGF2BP3O00425 579 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPHP4-208ENST00000478423 RHOCP08134 193 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 RALBP11234 206 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 DUSP28Q4G0W2 176 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 HGSNATQ68CP4 663 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 TMEM86AQ8N2M4 240 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 C12orf29Q8N999 325 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 HSFY1Q96LI6 401 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 SYT17Q9BSW7 474 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 AURKCQ9UQB9 309 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 CDYLQ9Y232 598 aa14.64□□□□□ -0.07
NPHP4-208ENST00000478423 NOS2P35228 1153 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 NR2C2P49116 596 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 SCNN1BP51168 640 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 RGMBQ6NW40 437 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 PRUNE1Q86TP1 453 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 HES6Q96HZ4 224 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 WNK4Q96J92 1243 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 FOPNLQ96NB1 174 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ARHGAP28Q9P2N2 729 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 VPS9D1Q9Y2B5 631 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ACOT9Q9Y305 439 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 NCANO14594 1321 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 RAMP2O60895 175 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 NOL4O94818 638 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 AMPD2Q01433 879 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 LRRC36Q1X8D7 754 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 PHF13Q86YI8 300 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 UNC45BQ8IWX7 931 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 WNT8BQ93098 351 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ADGRA2Q96PE1 1338 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 USP12O75317 370 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 SKAP2O75563 359 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 MYBL2P10244 700 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 YWHAQP27348 245 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 SERPINB8P50452 374 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ZNF143P52747 638 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ATXN3P54252 364 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ABCE1P61221 599 aaKnown RBP14.63□□□□□ -0.07
NPHP4-208ENST00000478423 SLC39A12Q504Y0 691 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 NSL1Q96IY1 281 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 TKTL2Q9H0I9 626 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 ATXN3LQ9H3M9 355 aa14.63□□□□□ -0.07
NPHP4-208ENST00000478423 NFKBIEO00221 500 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 DGKIO75912 1065 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 RAG1P15918 1043 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 NPR3P17342 541 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 TARSP26639 723 aaKnown RBP14.62□□□□□ -0.07
NPHP4-208ENST00000478423 FKBP1BP68106 108 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 PDE1CQ14123 709 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-208ENST00000478423 ARHGAP15Q53QZ3 475 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 NUP93Q8N1F7 819 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 CARNMT1Q8N4J0 409 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 SERPINB11Q96P15 392 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 RNF208Q9H0X6 261 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 DHX33Q9H6R0 707 aaKnown RBP14.62□□□□□ -0.07
NPHP4-208ENST00000478423 PKD2L2Q9NZM6 624 aa14.62□□□□□ -0.07
NPHP4-208ENST00000478423 TRMT6Q9UJA5 497 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms