RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CFHR3Q02985 330 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 SEMA3BQ13214 749 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 DNASE1L3Q13609 305 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 BLMHQ13867 455 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 TRIM14Q14142 442 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 PTK2BQ14289 1009 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 FAM90A2PQ658T7 463 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 TMEM65Q6PI78 240 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 CLASRPQ8N2M8 674 aaKnown RBP4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 LINC01465Q8N7H1 131 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 ATG16L2Q8NAA4 619 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 MAFAQ8NHW3 353 aaPredicted RBP4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 ADAMTS18Q8TE60 1221 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 HASPINQ8TF76 798 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 CCDC17Q96LX7 622 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 ARPC5LQ9BPX5 153 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 PRDM16Q9HAZ2 1276 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 RXFP3Q9NSD7 469 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 ASIC5Q9NY37 505 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 AOX1Q06278 1338 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 ARHGEF17Q96PE2 2063 aaPredicted RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 BTBD19C9JJ37 291 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 POC1B-GALNT4F8VUJ3 575 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 SYT5O00445 386 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 TPD52L2O43399 206 aaKnown RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 ASNA1O43681 348 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 TAF5LO75529 589 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 ANXA6P08133 673 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 TMIGD3P0DMS9 266 aaPredicted RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 MMP8P22894 467 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 GPC5P78333 572 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 NHLH1Q02575 133 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 PDCD2Q16342 344 aaPredicted RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 FAM187BQ17R55 369 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 CERKLQ49MI3 558 aaPredicted RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 TMEM119Q4V9L6 283 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 CCDC38Q502W7 563 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 PRAMEF17Q5VTA0 474 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 CCDC144NLQ6NUI1 221 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 ZNF788Q6ZQV5 615 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 DCDC5Q6ZRR9 648 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 PIK3AP1Q6ZUJ8 805 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 PTF1AQ7RTS3 328 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 KRT27Q7Z3Y8 459 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 NRSN1Q8IZ57 195 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 GALNT4Q8N4A0 578 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 PNLDC1Q8NA58 520 aaKnown RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 STYXQ8WUJ0 223 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 WDR60Q8WVS4 1066 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 EDC3Q96F86 508 aaKnown RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 LTV1Q96GA3 475 aaPredicted RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 RMDN3Q96TC7 470 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 SAP30LQ9HAJ7 183 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 FSCN3Q9NQT6 498 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 VPS45Q9NRW7 570 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 GAR1Q9NY12 217 aaKnown RBP4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 LRFN1Q9P244 771 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 FZD4Q9ULV1 537 aa4.54□□□□□ -1.68
SMARCA1-204ENST00000478420 TCRBV5S1A1TA0A578 114 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 CLIC1O00299 241 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 CTIFO43310 598 aaKnown RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 DHHO43323 396 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 TNFRSF6BO95407 300 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 CSTBP04080 98 aaKnown RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 ITGA5P08648 1049 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 CHRM5P08912 532 aaPredicted RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 GALNSP34059 522 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 TRAPPC10P48553 1259 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 POLE2P56282 527 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 PROK1P58294 105 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 NANOS3P60323 173 aaKnown RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 TUBA4AP68366 448 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 GALNT1Q10472 559 aaPredicted RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 KCNB1Q14721 858 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 GRM4Q14833 912 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 MFSD13AQ14CX5 517 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 PROSER3Q2NL68 480 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 FAM83BQ5T0W9 1011 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 RINT1Q6NUQ1 792 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 VSTM1Q6UX27 236 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 CHSY1Q86X52 802 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 TICAM2Q86XR7 235 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 SEMA6DQ8NFY4 1073 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 PRR11Q96HE9 360 aaPredicted RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 ADGRE3Q9BY15 652 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 TP63Q9H3D4 680 aaPredicted RBP4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 FBXO28Q9NVF7 368 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 DACT1Q9NYF0 836 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 PTGFRNQ9P2B2 879 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 PCDHB2Q9Y5E7 798 aa4.53□□□□□ -1.68
SMARCA1-204ENST00000478420 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 hCG_1642624A0A1W2PR95 340 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 MANSC4A6NHS7 340 aaPredicted RBP4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 LINC01548A6NM66 108 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 H3BNC9 293 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 ACKR2O00590 384 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 FCHO1O14526 889 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 FYB1O15117 783 aa4.52□□□□□ -1.69
SMARCA1-204ENST00000478420 DNPH1O43598 174 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms