RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 RTP2Q5QGT7 225 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 KANK2Q63ZY3 851 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 TXNDC11Q6PKC3 985 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 BZW1Q7L1Q6 419 aaKnown RBP8.17□□□□□ -1.1
FBXO42-204ENST00000478089 CTAGE6Q86UF2 777 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 CCDC50Q8IVM0 306 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 CTAGE4Q8IX94 777 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 CARFQ8N187 725 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 AVL9Q8NBF6 648 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 ZNF784Q8NCA9 323 aaPredicted RBP8.17□□□□□ -1.1
FBXO42-204ENST00000478089 TTLQ8NG68 377 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 HSPH1Q92598 858 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 TNFRSF25Q93038 417 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 RRP36Q96EU6 259 aaKnown RBP8.17□□□□□ -1.1
FBXO42-204ENST00000478089 HES6Q96HZ4 224 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 METTL2AQ96IZ6 378 aaKnown RBP8.17□□□□□ -1.1
FBXO42-204ENST00000478089 PPP1R13BQ96KQ4 1090 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 CARD6Q9BX69 1037 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 KRT23Q9C075 422 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 TMEM206Q9H813 350 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 OLA1Q9NTK5 396 aaKnown RBP8.17□□□□□ -1.1
FBXO42-204ENST00000478089 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 TBC1D29Q9UFV1 150 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 ASB3Q9Y575 518 aa8.17□□□□□ -1.1
FBXO42-204ENST00000478089 HEATR9A2RTY3 570 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 TLR2O60603 784 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ITGB3P05106 788 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 HSPA13P48723 471 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 GOLGA8FQ08AF8 430 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 GOLGA8DPQ0D2H9 430 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 HNRNPDQ14103 355 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ERV3-1Q14264 604 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 MBTPS1Q14703 1052 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 USP39Q53GS9 565 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 FAM209BQ5JX69 171 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CLVS2Q5SYC1 327 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 FBXO38Q6PIJ6 1188 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 LRIG3Q6UXM1 1119 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 EFHBQ8N7U6 833 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ZNF507Q8TCN5 953 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 PPP1R10Q96QC0 940 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 SELENOSQ9BQE4 189 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 HGH1Q9BTY7 390 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 TXLNGYQ9BZA5 131 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 FANCEQ9HB96 536 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 EURLQ9NYK6 297 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 HACD3Q9P035 362 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 INVSQ9Y283 1065 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 C4AP0C0L4 1744 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 C4BP0C0L5 1744 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 TIAM2Q8IVF5 1701 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ARHGEF37A1IGU5 675 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 NCF1BA6NI72 391 aaPredicted RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 NCF1CA8MVU1 366 aaPredicted RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 MEFVO15553 781 aaPredicted RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 AOC2O75106 756 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 EGFRP00533 1210 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CHRNA1P02708 482 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 MYZAPP0CAP1 466 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CYP2C9P11712 490 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ADD1P35611 737 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 GRIA4P48058 902 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 PTPN11Q06124 597 aaPredicted RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 MAP3K12Q12852 859 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ARID5BQ14865 1188 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 NR1D2Q14995 579 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ZNF674Q2M3X9 581 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 FSCBQ5H9T9 825 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CEP85LQ5SZL2 805 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 RPUSD3Q6P087 351 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 TRIM65Q6PJ69 517 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 NSMFQ6X4W1 530 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ZNF574Q6ZN55 896 aaPredicted RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 RFPL4BQ6ZWI9 263 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CCDC25Q86WR0 208 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 LINC00116Q8NCU8 138 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 GRK7Q8WTQ7 553 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CCDC127Q96BQ5 260 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 B3GNT5Q9BYG0 378 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CNGB3Q9NQW8 809 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CORO2BQ9UQ03 480 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 TSC22D4Q9Y3Q8 395 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CARMIL3Q8ND23 1372 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CHD4Q14839 1912 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 NHSQ6T4R5 1651 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 METTL12A8MUP2 240 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CSTBP04080 98 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CHRNB1P11230 501 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 FDPSP14324 419 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 ATF6P18850 670 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CASP5P51878 434 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 MAPK10P53779 464 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 RPP30P78346 268 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 HERC3Q15034 1050 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 FAM47CQ5HY64 1035 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 SPDYAQ5MJ70 313 aa8.16□□□□□ -1.1
FBXO42-204ENST00000478089 VARS2Q5ST30 1063 aaKnown RBP8.16□□□□□ -1.1
FBXO42-204ENST00000478089 CACNA2D3Q8IZS8 1091 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms