RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 FKBP10Q96AY3 582 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 PBKQ96KB5 322 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 GDF15Q99988 308 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 DPH1Q9BZG8 443 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 SERHLQ9NQF3 203 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 ZNF609O15014 1411 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 RIC1Q4ADV7 1423 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 A0A087WWL8 130 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 CFAP69A5D8W1 941 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 LINC00473A8K010 186 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 OVOL3O00110 214 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 PPM1DO15297 605 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 PPFIA2O75334 1257 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 PDHA1P08559 390 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 ELFN1P0C7U0 828 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 MMP14P50281 582 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 SLC13A2Q13183 592 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 GBX1Q14549 363 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 SLC10A5Q5PT55 438 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 ARHGAP40Q5TG30 622 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 FBXO42Q6P3S6 717 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 APOA5Q6Q788 366 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 MOB2Q70IA6 237 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 ADGRG3Q86Y34 549 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 FMNL3Q8IVF7 1028 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 WDR75Q8IWA0 830 aaKnown RBP5.57□□□□□ -1.52
VPS50-214ENST00000477935 TDHQ8IZJ6 230 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 FAM98AQ8NCA5 519 aaKnown RBP5.57□□□□□ -1.52
VPS50-214ENST00000477935 AGBL3Q8NEM8 1001 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 TTC8Q8TAM2 541 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 PTDSS2Q9BVG9 487 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 EHD3Q9NZN3 535 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 SLC17A6Q9P2U8 582 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 DKK3Q9UBP4 350 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 SHOC2Q9UQ13 582 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 CACNA1AO00555 2505 aa5.57□□□□□ -1.52
VPS50-214ENST00000477935 IBTKQ9P2D0 1353 aaPredicted RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 MYO1FO00160 1098 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 TPP1O14773 563 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 TBX3O15119 743 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 MARCH6O60337 910 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 TBC1D4O60343 1298 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 URI1O94763 535 aaPredicted RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 NR2F6P10588 404 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 PPIFP30405 207 aaKnown RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 CACNB3P54284 484 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 WNT3P56703 355 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 EIF2B5Q13144 721 aaKnown RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 GRM3Q14832 879 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 CHST15Q7LFX5 561 aaPredicted RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 PPP1R42Q7Z4L9 355 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 SRGAP1Q7Z6B7 1085 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 GRASPQ7Z6J2 395 aaPredicted RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 ZNF280BQ86YH2 543 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 BOLLQ8N9W6 283 aaKnown RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 FAM156AQ8NDB6 213 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 MAML1Q92585 1016 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 BBC3Q96PG8 261 aaPredicted RBP5.56□□□□□ -1.52
VPS50-214ENST00000477935 EYA3Q99504 573 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 MESP1Q9BRJ9 268 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 KLK15Q9H2R5 256 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 SMURF2Q9HAU4 748 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 IL17RBQ9NRM6 502 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 SEMA4GQ9NTN9 838 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 SERTAD3Q9UJW9 196 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 SSX2IPQ9Y2D8 614 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 ENTPD2Q9Y5L3 495 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 USP16Q9Y5T5 823 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 ANKRD26Q9UPS8 1709 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 SCN7AQ01118 1682 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 PCSK5Q92824 1860 aa5.56□□□□□ -1.52
VPS50-214ENST00000477935 FRMPD2Q68DX3 1309 aaPredicted RBP5.55□□□□□ -1.52
VPS50-214ENST00000477935 hCG_1984214I3L0E3 225 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 FRS3O43559 492 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 CYP2C9P11712 490 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 XRCC6P12956 609 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS50-214ENST00000477935 ZFXP17010 805 aaPredicted RBP5.55□□□□□ -1.52
VPS50-214ENST00000477935 HOXD10P28358 340 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 ELLP55199 621 aaPredicted RBP5.55□□□□□ -1.52
VPS50-214ENST00000477935 UBXN2AP68543 259 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 SP2Q02086 613 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 RAB32Q13637 225 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 TBCCQ15814 346 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 HLFQ16534 295 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 PARP10Q53GL7 1025 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 RGS7BPQ6MZT1 257 aaPredicted RBP5.55□□□□□ -1.52
VPS50-214ENST00000477935 CCDC149Q6ZUS6 474 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 RD3Q7Z3Z2 195 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 DTX2Q86UW9 622 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 MPP5Q8N3R9 675 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 SUCLG2Q96I99 432 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 UROC1Q96N76 676 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 MYOZ2Q9NPC6 264 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 ASB6Q9NWX5 421 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 OBP2AQ9NY56 170 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 NDRG4Q9ULP0 352 aaKnown RBP5.55□□□□□ -1.52
VPS50-214ENST00000477935 TPCN1Q9ULQ1 816 aa5.55□□□□□ -1.52
VPS50-214ENST00000477935 MRPS17Q9Y2R5 130 aaKnown RBP5.55□□□□□ -1.52
VPS50-214ENST00000477935 COX11Q9Y6N1 276 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms