RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 EML1O00423 815 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 KIAA0391O15091 583 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 CHMP2AO43633 222 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 ARHGEF15O94989 841 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 CREB1P16220 341 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 PSMC6P62333 389 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 FKBP3Q00688 224 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 GBE1Q04446 702 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 RALGDSQ12967 914 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 DGKZQ13574 1117 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 OGFOD2Q6N063 350 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 RNF207Q6ZRF8 634 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 ATG4CQ96DT6 458 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 THAP11Q96EK4 314 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 VPS35Q96QK1 796 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 NACC1Q96RE7 527 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 SERHL2Q9H4I8 314 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 CFAP99D6REC4 459 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 PODXLO00592 558 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 USP1O94782 785 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 SLITRK3O94933 977 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ARP10275 920 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 CCDC130P13994 396 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 GAP43P17677 238 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 DSG3P32926 999 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 NUDT1P36639 197 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 GPD2P43304 727 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 RPS6P62753 249 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 PSMD6Q15008 389 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 LRRC41Q15345 812 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 NPTX1Q15818 432 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 LSM12Q3MHD2 195 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 RAB3IL1Q8TBN0 382 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 HELQQ8TDG4 1101 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 KCND2Q9NZV8 630 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ARMCX3Q9UH62 379 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 XPO1O14980 1071 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 C6orf222P0C671 652 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ITGA4P13612 1032 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 PKLRP30613 574 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 CBX5P45973 191 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 HSPA13P48723 471 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 MYBPC1Q00872 1141 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 NR1H3Q13133 447 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ACAP1Q15027 740 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 STK11Q15831 433 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 MAN2A1Q16706 1144 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 MIIPQ5JXC2 388 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 HGSNATQ68CP4 663 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ADAMTSL2Q86TH1 951 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 GALNT13Q8IUC8 556 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 BRSK2Q8IWQ3 736 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 MTBPQ96DY7 904 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 ZNF486Q96H40 463 aaPredicted RBP13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 HES6Q96HZ4 224 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 KCNH7Q9NS40 1196 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 RNF146Q9NTX7 359 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 COL20A1Q9P218 1284 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 SIK3Q9Y2K2 1263 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
RTFDC1-207ENST00000477573 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 TRAF5O00463 557 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 DNAJA2O60884 412 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 SERPING1P05155 500 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 HOXB1P14653 301 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 ITGB5P18084 799 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 MLLT6P55198 1093 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 PRKCEQ02156 737 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 BTKQ06187 659 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 NCOA4Q13772 614 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 CTTNQ14247 550 aaKnown RBP13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 SLC18A3Q16572 532 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 DGKDQ16760 1214 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 NSMFQ6X4W1 530 aa13.06□□□□□ -0.32
RTFDC1-207ENST00000477573 GPR180Q86V85 440 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms