RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 CNOT3O75175 753 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TRMUO75648 421 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RHOBTB3O94955 611 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TNFAIP8O95379 198 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 DEXIO95424 95 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TTLL1O95922 423 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CLPTM1O96005 669 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RPN1P04843 607 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ASGR2P07307 311 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CSF1RP07333 972 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 HSPD1P10809 573 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CDK4P11802 303 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 UQCRBP14927 111 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NPR1P16066 1061 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RXRAP19793 462 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ENDOUP21128 410 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MUTP22033 750 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 GARTP22102 1010 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CCNE1P24864 410 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 GTF2H1P32780 548 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TTKP33981 857 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LONP1P36776 959 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 EIF4A3P38919 411 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 IGHMBP2P38935 993 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 KRT6CP48668 564 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CASP7P55210 303 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 STX17P56962 302 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 PTENP60484 403 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NOP14P78316 857 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 AMPD3Q01432 767 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CREB5Q02930 508 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 GRIN1Q05586 938 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CDK18Q07002 472 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 PPARAQ07869 468 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TBL3Q12788 808 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RAPGEF1Q13905 1077 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MPP2Q14168 576 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LPIN1Q14693 890 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RASA2Q15283 850 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 SLC18A3Q16572 532 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 USP41Q3LFD5 358 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ARL13BQ3SXY8 428 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CRY2Q49AN0 593 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 DNAL1Q4LDG9 190 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 EAPPQ56P03 285 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 HSP90AA4PQ58FG1 418 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 DUPD1Q68J44 220 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NXNQ6DKJ4 435 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 OVOS1Q6IE37 1185 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NIPAL1Q6NVV3 410 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CCDC62Q6P9F0 684 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TTC23LQ6PF05 361 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LMBR1LQ6UX01 489 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LINC00299Q6ZSB3 139 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 STOX1Q6ZVD7 989 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NEK10Q6ZWH5 1172 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 GET4Q7L5D6 327 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MIER3Q7Z3K6 550 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TMC4Q7Z404 712 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 VPS36Q86VN1 386 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF761Q86XN6 746 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TMPRSS6Q8IU80 811 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MB21D2Q8IYB1 491 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 AHI1Q8N157 1196 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 VPS52Q8N1B4 723 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 KIF2BQ8N4N8 673 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CCDC89Q8N998 374 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 GOLM1Q8NBJ4 401 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 BBOF1Q8ND07 529 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TTLL11Q8NHH1 800 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ACMSDQ8TDX5 336 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 UCMAQ8WVF2 138 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 STARD8Q92502 1023 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MCUR1Q96AQ8 359 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 SLC7A6OSQ96CW6 309 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MASTLQ96GX5 879 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 SUCLG2Q96I99 432 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NSL1Q96IY1 281 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LOXL4Q96JB6 756 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CCDC138Q96M89 665 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CFAP57Q96MR6 1250 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 PRICKLE1Q96MT3 831 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TTC25Q96NG3 672 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TMEM74Q96NL1 305 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 SAMD11Q96NU1 681 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TGS1Q96RS0 853 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CRAMP1Q96RY5 1269 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ERP44Q9BS26 406 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MRIQ9BWK5 157 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LRRC27Q9C0I9 530 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RNF38Q9H0F5 515 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NCOA5Q9HCD5 579 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TRPC7Q9HCX4 862 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CD209Q9NNX6 404 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 VPS45Q9NRW7 570 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TYW1Q9NV66 732 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ETNK2Q9NVF9 386 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 SPATA6Q9NWH7 488 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NDE1Q9NXR1 346 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 KIAA1522Q9P206 1035 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms