RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SNX16P57768 344 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 OGDHQ02218 1023 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 TNK2Q07912 1038 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 MAMLD1Q13495 774 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 C15orf59Q2T9L4 293 aaPredicted RBP16.57■□□□□ 0.24
COPS3-207ENST00000477299 PPP1R15BQ5SWA1 713 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 KLHDC10Q6PID8 442 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 ZDHHC17Q8IUH5 632 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 MSANTD4Q8NCY6 345 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 BPIFB1Q8TDL5 484 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 RXFP2Q8WXD0 754 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 GOLGA1Q92805 767 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 ZNF653Q96CK0 615 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 P2RY11Q96G91 374 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 CCDC42Q96M95 316 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 CFAP57Q96MR6 1250 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 TBCBQ99426 244 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 DEF6Q9H4E7 631 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 IGSF9Q9P2J2 1179 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
COPS3-207ENST00000477299 ZMYM5Q9UJ78 669 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 OTOL1A6NHN0 477 aaPredicted RBP16.56■□□□□ 0.24
COPS3-207ENST00000477299 SIGLEC16A6NMB1 481 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 IGLV3-25P01717 112 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 GLI1P08151 1106 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 KRT3P12035 628 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 ARSAP15289 507 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 MATKP42679 507 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 GSCP56915 257 aaPredicted RBP16.56■□□□□ 0.24
COPS3-207ENST00000477299 FCHO2Q0JRZ9 810 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 TDGQ13569 410 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 BBS7Q8IWZ6 715 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 C3orf20Q8ND61 904 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 MCEEQ96PE7 176 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 NPY6RQ99463 290 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
COPS3-207ENST00000477299 TMPRSS4Q9NRS4 437 aa16.56■□□□□ 0.24
COPS3-207ENST00000477299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
COPS3-207ENST00000477299 ATG2BQ96BY7 2078 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 C2CD4BA6NLJ0 364 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 NOS2P35228 1153 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 SCNN1AP37088 669 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 ATP11AP98196 1134 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 EIF4EBP2Q13542 120 aaPredicted RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 CCDC14Q49A88 953 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 ZC3H12AQ5D1E8 599 aaKnown RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 DNAJC24Q6P3W2 148 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 BEND5Q7L4P6 421 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 NT5C3BQ969T7 300 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 VCPIP1Q96JH7 1222 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 FCRL2Q96LA5 508 aaPredicted RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 BAG1Q99933 345 aaPredicted RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 FAM83CQ9BQN1 747 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 SELENOOQ9BVL4 669 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 TRMT61BQ9BVS5 477 aaKnown RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 COL25A1Q9BXS0 654 aaPredicted RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 MAGEB5Q9BZ81 275 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 EBF3Q9H4W6 596 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 HPS4Q9NQG7 708 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 ANLNQ9NQW6 1124 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 OLA1Q9NTK5 396 aaKnown RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 OBP2AQ9NY56 170 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 GTSE1Q9NYZ3 720 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 WDR35Q9P2L0 1181 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 XPO7Q9UIA9 1087 aaKnown RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 STRIP2Q9ULQ0 834 aa16.55■□□□□ 0.24
COPS3-207ENST00000477299 REXO2Q9Y3B8 237 aaKnown RBP16.55■□□□□ 0.24
COPS3-207ENST00000477299 A0A0U1RQJ8 604 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 GOLGA6L7A0A1B0GV03 622 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 I6L893 689 aaPredicted RBP16.54■□□□□ 0.24
COPS3-207ENST00000477299 M0QYT0 321 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 ARNTLO00327 626 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 IGLV3-27P01718 113 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 TCF3P15923 654 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 PDGFRAP16234 1089 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 SULT1E1P49888 294 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 TBX4P57082 545 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 ZNF252P-AS1Q0IIN9 211 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 NME3Q13232 169 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
COPS3-207ENST00000477299 CDO1Q16878 200 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 HTR3DQ70Z44 454 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 CPNE8Q86YQ8 564 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 DENND1CQ8IV53 801 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 ATRIPQ8WXE1 791 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 NXPE3Q969Y0 559 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 SLC39A13Q96H72 371 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 BTBD6Q96KE9 485 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 CDK5RAP1Q96SZ6 601 aaKnown RBP16.54■□□□□ 0.24
COPS3-207ENST00000477299 KIF9Q9HAQ2 790 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 PIGVQ9NUD9 493 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 DUS2Q9NX74 493 aaKnown RBP16.54■□□□□ 0.24
COPS3-207ENST00000477299 SORCS3Q9UPU3 1222 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 SH3BP1Q9Y3L3 701 aa16.54■□□□□ 0.24
COPS3-207ENST00000477299 EPN1Q9Y6I3 576 aaPredicted RBP16.54■□□□□ 0.24
COPS3-207ENST00000477299 TRIOO75962 3097 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms