RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 STRA6Q9BX79 667 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 HPS4Q9NQG7 708 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 INTS13Q9NVM9 706 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 L1RE1Q9UN81 338 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 ARHGAP26Q9UNA1 814 aa7.73□□□□□ -1.17
BRCA1-214ENST00000477152 NCANO14594 1321 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 GABRDO14764 452 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 RTN3O95197 1032 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 EGFP01133 1207 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 APODP05090 189 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 P4HA1P13674 534 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 TNNI1P19237 187 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 WARSP23381 471 aaKnown RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 ADSSP30520 456 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 GNL1P36915 607 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 EIF2DP41214 584 aaKnown RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 AP3M2P53677 418 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 SRSF11Q05519 484 aaKnown RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 SRSF5Q13243 272 aaKnown RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 ZNF77Q15935 545 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 STPG1Q5TH74 334 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 BTBD8Q5XKL5 378 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 TRIM68Q6AZZ1 485 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 FAM171BQ6P995 826 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 C20orf204Q6ZNR8 217 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 KBTBD6Q86V97 674 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 RELL1Q8IUW5 271 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 IQUBQ8NA54 791 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 GOLGA5Q8TBA6 731 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 GRIN3AQ8TCU5 1115 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 SH3RF2Q8TEC5 729 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 OTUB2Q96DC9 234 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 INTS4Q96HW7 963 aaKnown RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 ELOVL4Q9GZR5 314 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 ADAM19Q9H013 955 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 FBXO2Q9UK22 296 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-214ENST00000477152 CLIC4Q9Y696 253 aa7.72□□□□□ -1.17
BRCA1-214ENST00000477152 FRMD3A2A2Y4 597 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 CAVIN2O95810 425 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 PF4P02776 101 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 ESRRAP11474 423 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 ARSAP15289 507 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 TFE3P19532 575 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 ACAT1P24752 427 aaKnown RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 ATICP31939 592 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 EIF4A3P38919 411 aaKnown RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 NOP14P78316 857 aaKnown RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 CREB5Q02930 508 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 GOLGA8FQ08AF8 430 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 GOLGA8DPQ0D2H9 430 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 LMAN2Q12907 356 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 CUL4AQ13619 759 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 SLC39A14Q15043 492 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 PLK5Q496M5 336 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 EOGTQ5NDL2 527 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 RABEPKQ7Z6M1 372 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 TMEM150AQ86TG1 271 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 GOLGA6L1Q8N7Z2 621 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 ARL14EPQ8N8R7 260 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 OR6B3Q8NGW1 331 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 MYCBPAPQ8TBZ2 947 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 OVCA2Q8WZ82 227 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 SYAP1Q96A49 352 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-214ENST00000477152 DNAJC19Q96DA6 116 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 C8orf48Q96LL4 319 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 SPON2Q9BUD6 331 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 MTMR12Q9C0I1 747 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 PCIF1Q9H4Z3 704 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 PDE11AQ9HCR9 933 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 TMLHEQ9NVH6 421 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 COMMD8Q9NX08 183 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 CCL26Q9Y258 94 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 ANAPC1Q9H1A4 1944 aa7.71□□□□□ -1.17
BRCA1-214ENST00000477152 GOLGA8IPA6NC78 632 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 GOLGA8JA6NMD2 632 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 TISP43B9A030 160 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 M0R082 166 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 TACC1O75410 805 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 ALAS2P22557 587 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 SLC7A9P82251 487 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 CEBPZQ03701 1054 aaKnown RBP7.71□□□□□ -1.18
BRCA1-214ENST00000477152 GRIN1Q05586 938 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 SOWAHAQ2M3V2 549 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 SPDYCQ5MJ68 293 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 SDE2Q6IQ49 451 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF417Q8TAU3 575 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 TNIP3Q96KP6 325 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 RHOVQ96L33 236 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF587Q96SQ5 575 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-214ENST00000477152 PNKPQ96T60 521 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 CEP44Q9C0F1 390 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 NACA2Q9H009 215 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 SLC32A1Q9H598 525 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 FRRS1LQ9P0K9 344 aa7.71□□□□□ -1.18
BRCA1-214ENST00000477152 BCCIPQ9P287 314 aaKnown RBP eCLIP7.71□□□□□ -1.18
BRCA1-214ENST00000477152 LINC01387J3KSC0 135 aa7.7□□□□□ -1.18
BRCA1-214ENST00000477152 PPP6R2O75170 966 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms