RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 TICAM1Q8IUC6 712 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PM20D2Q8IYS1 436 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SLC43A2Q8N370 569 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SIMC1Q8NDZ2 872 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 RIN3Q8TB24 985 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 KCNG4Q8TDN1 519 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ABHD17AQ96GS6 310 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF560Q96MR9 790 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 REXO4Q9GZR2 422 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 RC3H2Q9HBD1 1191 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 AGO4Q9HCK5 861 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 RMND1Q9NWS8 449 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 WHRNQ9P202 907 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 DCDC2Q9UHG0 476 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 MAD2L2Q9UI95 211 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 CAPN11Q9UMQ6 739 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 KIAA1024Q9UPX6 916 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 GOLGA8QA0A0J9YX86 632 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SERTM2A0A1B0GWG4 89 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 TMEM120BA0PK00 339 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 BTBD19C9JJ37 291 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ATP6V1G2-DDX39BF2Z307 99 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 H0YAE9 185 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SLC9A3R1O14745 358 aaPredicted RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SMAD7O15105 426 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PEX11AO75192 247 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PDE5AO76074 875 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PSAPP07602 524 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 NFICP08651 508 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SERPINF2P08697 491 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SLC9A1P19634 815 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 TUBG1P23258 451 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SCAND1P57086 179 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 RAC3P60763 192 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 UBE2HP62256 183 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF177Q13360 481 aaPredicted RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 FAM187BQ17R55 369 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 CCDC58Q4VC31 144 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF805Q5CZA5 627 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PIK3R6Q5UE93 754 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PRPF40BQ6NWY9 871 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 KLHDC10Q6PID8 442 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 LMBR1LQ6UX01 489 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 LBX2Q6XYB7 198 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 TREML1Q86YW5 311 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SFRP1Q8N474 314 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 TBC1D19Q8N5T2 526 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ATAD1Q8NBU5 361 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 HIPK4Q8NE63 616 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 LEO1Q8WVC0 666 aaPredicted RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 WFDC12Q8WWY7 111 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 KIAA1143Q96AT1 154 aaPredicted RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 STAMBPL1Q96FJ0 436 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ZNF274Q96GC6 653 aaPredicted RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 SEC22CQ9BRL7 303 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ZKSCAN3Q9BRR0 538 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 FUT8Q9BYC5 575 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 RBCK1Q9BYM8 510 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 CRNKL1Q9BZJ0 848 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 TRIT1Q9H3H1 467 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 TUBG2Q9NRH3 451 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 WWOXQ9NZC7 414 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 DNAJB4Q9UDY4 337 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PRKAG3Q9UGI9 489 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 PPIL1Q9Y3C6 166 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 USP3Q9Y6I4 520 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 ADCY9O60503 1353 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 KIF24Q5T7B8 1368 aa6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 URB2Q14146 1524 aaKnown RBP6.18□□□□□ -1.42
SPTLC3-205ENST00000476791 UBN2Q6ZU65 1347 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 A0A1B0GTH6 734 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 A0A1W2PPW3 197 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 MAGEA13PA6NCF6 341 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 TMEM114B3SHH9 223 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 KCNJ18B7U540 433 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 FBP2O00757 339 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 N4BP3O15049 544 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 PLA2G6O60733 806 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 ADAM23O75077 832 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 H2AFYO75367 372 aaKnown RBP6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 ZBED1O96006 694 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 ANXA6P08133 673 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 PCSK2P16519 638 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 RHCEP18577 417 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 HLA-FP30511 346 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 RCVRNP35243 200 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 RAB14P61106 215 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 RHDQ02161 417 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 KCNJ12Q14500 433 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 ANKRD20A4Q4UJ75 823 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 ANKRD20A1Q5TYW2 823 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 C1orf53Q5VUE5 145 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 SNRNP48Q6IEG0 339 aaKnown RBP6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 PAOXQ6QHF9 649 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 KBTBD6Q86V97 674 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 RNF169Q8NCN4 708 aa6.17□□□□□ -1.42
SPTLC3-205ENST00000476791 RAB3IL1Q8TBN0 382 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms