RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 M0QYV0 167 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 SGK1O00141 431 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 BRD2P25440 801 aaKnown RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 GBP1P32455 592 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 TIE1P35590 1138 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 MFAP3P55082 362 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 CCDC6Q16204 474 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 ANO4Q32M45 955 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 HSP90AA4PQ58FG1 418 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 RAB41Q5JT25 222 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 PMS2CLQ68D20 193 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 LCLAT1Q6UWP7 414 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 TMEM92Q6UXU6 159 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 RSRC2Q7L4I2 434 aaKnown RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 TRMT11Q7Z4G4 463 aaKnown RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 SIX6OS1Q8N1H7 587 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 TERB1Q8NA31 727 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 OLIG1Q8TAK6 271 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 UBA3Q8TBC4 463 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 WBP2Q969T9 261 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 POLMQ9NP87 494 aaPredicted RBP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 CLIC5Q9NZA1 410 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 MARK1Q9P0L2 795 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 WDR35Q9P2L0 1181 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL1A1-205ENST00000476387 ACACBO00763 2458 aa16.98■□□□□ 0.31
COL1A1-205ENST00000476387 ABCA7Q8IZY2 2146 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 TULP2O00295 520 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 PES1O00541 588 aaKnown RBP16.97■□□□□ 0.31
COL1A1-205ENST00000476387 CACNG3O60359 315 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 ZBED1O96006 694 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 HNRNPLP14866 589 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL1A1-205ENST00000476387 PLA2G4AP47712 749 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 ZNF132P52740 706 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 ADIGQ0VDE8 80 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 CNGA2Q16280 664 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 PPM1JQ5JR12 505 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 IL31Q6EBC2 164 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 SASS6Q6UVJ0 657 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 RBM43Q6ZSC3 357 aaKnown RBP16.97■□□□□ 0.31
COL1A1-205ENST00000476387 SCD5Q86SK9 330 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 TFAP2BQ92481 460 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 ULBP1Q9BZM6 244 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 APEX2Q9UBZ4 518 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 NUDT5Q9UKK9 219 aa16.97■□□□□ 0.31
COL1A1-205ENST00000476387 KCNJ18B7U540 433 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 RNF225M0QZC1 329 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-205ENST00000476387 MDM4O15151 490 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 ADAM23O75077 832 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 CAVIN2O95810 425 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 ADRB1P08588 477 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 SLC9A1P19634 815 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 YWHAGP61981 247 aaKnown RBP eCLIP16.96■□□□□ 0.31
COL1A1-205ENST00000476387 CREB5Q02930 508 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 KCNJ12Q14500 433 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 GRAMD4Q6IC98 578 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 Q6ZNB5 142 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 MIB1Q86YT6 1006 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 NAT16Q8N8M0 369 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 XPO6Q96QU8 1125 aaKnown RBP16.96■□□□□ 0.31
COL1A1-205ENST00000476387 TUBGCP2Q9BSJ2 902 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 BBS2Q9BXC9 721 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 NDST4Q9H3R1 872 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 RASAL2Q9UJF2 1139 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 STRIP2Q9ULQ0 834 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 STARD13Q9Y3M8 1113 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 NFE2L3Q9Y4A8 694 aa16.96■□□□□ 0.31
COL1A1-205ENST00000476387 LAMA1P25391 3075 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 NEDD8-MDP1E9PL57 170 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 TM4SF5O14894 197 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 MED7O43513 233 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 CALCAP01258 141 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 LCP1P13796 627 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 TYRP14679 529 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 USP8P40818 1118 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 P2RY2P41231 377 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 RGS7P49802 495 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 EFEMP1Q12805 493 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 BYSLQ13895 437 aaKnown RBP16.95■□□□□ 0.3
COL1A1-205ENST00000476387 STX1AQ16623 288 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 ARHGAP44Q17R89 818 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 VWA3BQ502W6 1294 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 PKDCCQ504Y2 493 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 C10orf76Q5T2E6 689 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 CCDC183Q5T5S1 534 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 STPG1Q5TH74 334 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 GJB7Q6PEY0 223 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-205ENST00000476387 KCTD13Q8WZ19 329 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 SPACA7Q96KW9 195 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 SMOC1Q9H4F8 434 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 CNGB3Q9NQW8 809 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 RXFP3Q9NSD7 469 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 DNAJC17Q9NVM6 304 aaKnown RBP16.95■□□□□ 0.3
COL1A1-205ENST00000476387 ANO10Q9NW15 660 aa16.95■□□□□ 0.3
COL1A1-205ENST00000476387 CNTN6Q9UQ52 1028 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms