RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MED7O43513 233 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 CACNG3O60359 315 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 MBD3O95983 291 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 EEF1GP26641 437 aaKnown RBP22.13■■□□□ 1.13
LIME1-204ENST00000476183 KIR2DL1P43626 348 aaPredicted RBP22.13■■□□□ 1.13
LIME1-204ENST00000476183 TRIP4Q15650 581 aaPredicted RBP22.13■■□□□ 1.13
LIME1-204ENST00000476183 MEA1Q16626 185 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 CDKAL1Q5VV42 579 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 DENND1CQ8IV53 801 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 DCLK2Q8N568 766 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 CCDC33Q8N5R6 958 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 CCDC26Q8TAB7 109 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 RNF139Q8WU17 664 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 BHMTQ93088 406 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 ACDQ96AP0 544 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 DCLK3Q9C098 648 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 ZDHHC4Q9NPG8 344 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 ST7Q9NRC1 585 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 WDR35Q9P2L0 1181 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 ZNF510Q9Y2H8 683 aa22.13■■□□□ 1.13
LIME1-204ENST00000476183 SDK1Q7Z5N4 2213 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 EML5Q05BV3 1969 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 MSI1O43347 362 aaKnown RBP22.12■■□□□ 1.13
LIME1-204ENST00000476183 FBXO21O94952 628 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 LTFP02788 710 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 TNFRSF4P43489 277 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 MRPS21P82921 87 aaKnown RBP22.12■■□□□ 1.13
LIME1-204ENST00000476183 CCDC183Q5T5S1 534 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 MSANTD2Q6P1R3 559 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 SASS6Q6UVJ0 657 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 SCUBE3Q8IX30 993 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 TERB1Q8NA31 727 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 PLD4Q96BZ4 506 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 SLC4A5Q9BY07 1137 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 DNAJC17Q9NVM6 304 aaKnown RBP22.12■■□□□ 1.13
LIME1-204ENST00000476183 PLK2Q9NYY3 685 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 HCN2Q9UL51 889 aa22.12■■□□□ 1.13
LIME1-204ENST00000476183 TBC1D3BA6NDS4 549 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 PES1O00541 588 aaKnown RBP22.11■■□□□ 1.13
LIME1-204ENST00000476183 FYNP06241 537 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 HNRNPLP14866 589 aaKnown RBP eCLIP22.11■■□□□ 1.13
LIME1-204ENST00000476183 CLCN1P35523 988 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 TIE1P35590 1138 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 KRT31Q15323 416 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 LPAL2Q16609 132 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 KLHDC7AQ5VTJ3 777 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 TOGARAM2Q6ZUX3 1019 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 WDTC1Q8N5D0 677 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 CAMKK1Q8N5S9 505 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 ALLCQ8N6M5 410 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 IL17RCQ8NAC3 791 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 STK32AQ8WU08 396 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 RUBCNQ92622 972 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 ANO10Q9NW15 660 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 FANCLQ9NW38 375 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 TMEM63CQ9P1W3 806 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 TJP2Q9UDY2 1190 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 MMP17Q9ULZ9 603 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 HBS1LQ9Y450 684 aaKnown RBP22.11■■□□□ 1.13
LIME1-204ENST00000476183 FHOD1Q9Y613 1164 aa22.11■■□□□ 1.13
LIME1-204ENST00000476183 E5RJQ4 531 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 PAPSS1O43252 624 aaPredicted RBP22.1■■□□□ 1.13
LIME1-204ENST00000476183 KLF8O95600 359 aaPredicted RBP22.1■■□□□ 1.13
LIME1-204ENST00000476183 PENKP01210 267 aaPredicted RBP22.1■■□□□ 1.13
LIME1-204ENST00000476183 CISD3P0C7P0 127 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 CNR2P34972 360 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 STX1AQ16623 288 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 FYB2Q5VWT5 728 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 GRAMD4Q6IC98 578 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 PRR23BQ6ZRT6 265 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 TMEM110Q86TL2 294 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 SLC47A2Q86VL8 602 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 FAM217AQ8IXS0 508 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 FAM71AQ8IYT1 594 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 TXNDC5Q8NBS9 432 aaKnown RBP22.1■■□□□ 1.13
LIME1-204ENST00000476183 XPO6Q96QU8 1125 aaKnown RBP22.1■■□□□ 1.13
LIME1-204ENST00000476183 LSM14BQ9BX40 385 aaKnown RBP22.1■■□□□ 1.13
LIME1-204ENST00000476183 VPS16Q9H269 839 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 FBXO10Q9UK96 956 aa22.1■■□□□ 1.13
LIME1-204ENST00000476183 SPAG17Q6Q759 2223 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 DMXL1Q9Y485 3027 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 CCDC163A0A0D9SF12 145 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 SGK1O00141 431 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 ADAM23O75077 832 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 APBB3O95704 486 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 CHKAP35790 457 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 ACADSBP45954 432 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 PDCLQ13371 301 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 SIM2Q14190 667 aaPredicted RBP22.09■■□□□ 1.13
LIME1-204ENST00000476183 DRAP1Q14919 205 aaPredicted RBP22.09■■□□□ 1.13
LIME1-204ENST00000476183 C10orf76Q5T2E6 689 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 SMYD5Q6GMV2 418 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 TMEM92Q6UXU6 159 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 PASD1Q8IV76 773 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 HINFPQ9BQA5 517 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 NAA15Q9BXJ9 866 aaKnown RBP22.09■■□□□ 1.13
LIME1-204ENST00000476183 PCDHGC3Q9UN70 934 aa22.09■■□□□ 1.13
LIME1-204ENST00000476183 PRRT4C9JH25 899 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 PTK2Q05397 1052 aa22.08■■□□□ 1.13
LIME1-204ENST00000476183 RAPGEF1Q13905 1077 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms