RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 C12orf40Q86WS4 652 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 KCTD13Q8WZ19 329 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 DDX1Q92499 740 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 WBP2Q969T9 261 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 XPO6Q96QU8 1125 aaKnown RBP11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 HHIPQ96QV1 700 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 BBS2Q9BXC9 721 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 DCLK3Q9C098 648 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 CNGB3Q9NQW8 809 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 MARK1Q9P0L2 795 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 DEC1Q9P2X7 70 aa11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
NUDCD3-206ENST00000475952 GTPBP10A4D1E9 387 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 NEDD8-MDP1E9PL57 170 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 GREM1O60565 184 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TULP3O75386 442 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 STC2O76061 302 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 APBB3O95704 486 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 KRT5P13647 590 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 SLC6A11P48066 632 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 SRSF5Q13243 272 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 CNGA2Q16280 664 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 DPCR1Q3MIW9 517 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TRIM65Q6PJ69 517 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 Q6ZNB5 142 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TPGS1Q6ZTW0 290 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TMEM25Q86YD3 366 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 ETFBKMTQ8IXQ9 262 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 SCML4Q8N228 414 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 NAT16Q8N8M0 369 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TERB1Q8NA31 727 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TSTD1Q8NFU3 115 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 RNF139Q8WU17 664 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TFAP2BQ92481 460 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 GOLGA1Q92805 767 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 PLD4Q96BZ4 506 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 THAP9Q9H5L6 903 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 UBE2TQ9NPD8 197 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 ABCC13Q9NSE7 274 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 MARCH2Q9P0N8 246 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 WDR35Q9P2L0 1181 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 MMP17Q9ULZ9 603 aa11.93□□□□□ -0.5
NUDCD3-206ENST00000475952 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 TM4SF5O14894 197 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 AXIN1O15169 862 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 MED7O43513 233 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 HRO43593 1189 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 CACNG3O60359 315 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 RPP40O75818 363 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 PROS1P07225 676 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 HMBSP08397 361 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 LCP1P13796 627 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 TYRP14679 529 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 ERCC5P28715 1186 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 CORO1AP31146 461 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 CHKAP35790 457 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 TNFRSF4P43489 277 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 PXNP49023 591 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 MFAP3P55082 362 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 DAOAP59103 153 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 ACAP1Q15027 740 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 MEA1Q16626 185 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 MAN2A1Q16706 1144 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 EOGTQ5NDL2 527 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 IL31Q6EBC2 164 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 GRAMD4Q6IC98 578 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 TRMT11Q7Z4G4 463 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 SLC35F5Q8WV83 523 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 GAB3Q8WWW8 586 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 IRGQQ8WZA9 623 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 MED15Q96RN5 788 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 CRACR2AQ9BSW2 395 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 LMBRD1Q9NUN5 540 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 DNAJC17Q9NVM6 304 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 APEX2Q9UBZ4 518 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 MUC22E2RYF6 1773 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-206ENST00000475952 GON4LQ3T8J9 2241 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 A0A0A0MRY4 1105 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 SLC12A8A0AV02 714 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 YJEFN3A6XGL0 299 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 E7ENQ6 273 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 FOXD2O60548 495 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 ALDH1A2O94788 518 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 FBXO21O94952 628 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 GNA15P30679 374 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 TIE1P35590 1138 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 RGS7P49802 495 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 DGKEP52429 567 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 LIMK1P53667 647 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms