RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 NELFCDQ8IXH7 590 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 DEFB119Q8N690 84 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 HMGB4Q8WW32 186 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 OVCA2Q8WZ82 227 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 FBXO32Q969P5 355 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 P2RY11Q96G91 374 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 SLITRK1Q96PX8 696 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
CALD1-217ENST00000475772 C7orf25Q9BPX7 421 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 ELOVL4Q9GZR5 314 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 SMYD3Q9H7B4 428 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 VRTNQ9H8Y1 702 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 EHD2Q9NZN4 543 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
CALD1-217ENST00000475772 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
CALD1-217ENST00000475772 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
CALD1-217ENST00000475772 A0A1W2PQF6 199 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 TCRBV21S2A2A0A5A6 115 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 TBC1D3BA6NDS4 549 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 HOXC11O43248 304 aaPredicted RBP11.05□□□□□ -0.64
CALD1-217ENST00000475772 RTN3O95197 1032 aaPredicted RBP11.05□□□□□ -0.64
CALD1-217ENST00000475772 VNN1O95497 513 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 CYP2J2P51589 502 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 SLC5A3P53794 718 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 FAM193AP78312 1265 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 SEMA3BQ13214 749 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 SPDYCQ5MJ68 293 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 FAM26FQ5R3K3 315 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 HECTD3Q5T447 861 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 C12orf56Q8IXR9 622 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 XXYLT1Q8NBI6 393 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 DHX58Q96C10 678 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 OTUB2Q96DC9 234 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 ACOX2Q99424 681 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 SMOQ99835 787 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 CAPN10Q9HC96 672 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 CD93Q9NPY3 652 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 SPHK2Q9NRA0 654 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 GMIPQ9P107 970 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 STARD13Q9Y3M8 1113 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 CELSR3Q9NYQ7 3312 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 DSPP15924 2871 aaKnown RBP11.05□□□□□ -0.64
CALD1-217ENST00000475772 NUMA1Q14980 2115 aa11.05□□□□□ -0.64
CALD1-217ENST00000475772 FREM2Q5SZK8 3169 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 FASNP49327 2511 aaKnown RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 IGHV1OR15-9A0A0B4J2B8 117 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 SRRM3A6NNA2 597 aaPredicted RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 UPK3BL1B0FP48 263 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 TMEM229AB2RXF0 380 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 PRRT4C9JH25 899 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 UPK3BL2E5RIL1 263 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 SPTLC2O15270 562 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 HYAL3O43820 417 aaPredicted RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 PPP6R2O75170 966 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 TBX18O95935 607 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 CAPNS1P04632 268 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 ATICP31939 592 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 WASP42768 502 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 MAPK8P45983 427 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 TUBP50607 506 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 TNNC1P63316 161 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 ASIC1P78348 528 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 CLDN10P78369 228 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 LMAN2Q12907 356 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 BMT2Q1RMZ1 405 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 LYSMD4Q5XG99 296 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 KIAA1211LQ6NV74 962 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 STXBP4Q6ZWJ1 553 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 UNC13DQ70J99 1090 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 DDX42Q86XP3 938 aaKnown RBP eCLIP11.04□□□□□ -0.64
CALD1-217ENST00000475772 SLC41A1Q8IVJ1 513 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 FUKQ8N0W3 1084 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 ZNF513Q8N8E2 541 aaPredicted RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 PDZD8Q8NEN9 1154 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 PARD3BQ8TEW8 1205 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 INTS4Q96HW7 963 aaKnown RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 NUSAP1Q9BXS6 441 aaKnown RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 LRRC27Q9C0I9 530 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 BLZF1Q9H2G9 400 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 DMAC2Q9NW81 257 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 COMMD8Q9NX08 183 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 OSER1Q9NX31 292 aa11.04□□□□□ -0.64
CALD1-217ENST00000475772 BCCIPQ9P287 314 aaKnown RBP eCLIP11.04□□□□□ -0.64
CALD1-217ENST00000475772 GOLGA4Q13439 2230 aaKnown RBP11.04□□□□□ -0.64
CALD1-217ENST00000475772 SPAARA0A1B0GVQ0 90 aa11.03□□□□□ -0.64
CALD1-217ENST00000475772 FAM221BA6H8Z2 402 aa11.03□□□□□ -0.64
CALD1-217ENST00000475772 LRRIQ3A6PVS8 624 aaPredicted RBP11.03□□□□□ -0.64
CALD1-217ENST00000475772 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.03□□□□□ -0.64
CALD1-217ENST00000475772 HHLA1C9JL84 531 aa11.03□□□□□ -0.64
CALD1-217ENST00000475772 TAF4O00268 1085 aa11.03□□□□□ -0.64
CALD1-217ENST00000475772 STX6O43752 255 aa11.03□□□□□ -0.64
CALD1-217ENST00000475772 KLRC4O43908 158 aa11.03□□□□□ -0.64
CALD1-217ENST00000475772 CISD3P0C7P0 127 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms