RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TBC1D20Q96BZ9 403 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 SDHCQ99643 169 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 TMEM47Q9BQJ4 181 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 REEP2Q9BRK0 252 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 DKK3Q9UBP4 350 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 STK38LQ9Y2H1 464 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MAD1L1Q9Y6D9 718 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 hCG_1818297A0A087WSY0 165 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 DYTNA2CJ06 578 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 CENPBD1B2RD01 187 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 M0QX08 132 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PITPNM1O00562 1244 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 HRO43593 1189 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TOM1O60784 492 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PSMD10O75832 226 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 DNAJB5O75953 348 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PROSCO94903 275 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TDP2O95551 362 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ZCCHC18P0CG32 403 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TROVE2P10155 538 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP16-205ENST00000474835 ABCB4P21439 1286 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 S100A1P23297 94 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ALDH1A3P47895 512 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 IDH3AP50213 366 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 CLCNKBP51801 687 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 FKBP4Q02790 459 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP16-205ENST00000474835 GALNT1Q10472 559 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 TRAP1Q12931 704 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 SPP2Q13103 211 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TUBA3CQ13748 450 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 LRP8Q14114 963 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 UBE4AQ14139 1066 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ATP6AP1Q15904 470 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PSMD5Q16401 504 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 INAVAQ3KP66 663 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 CDONQ4KMG0 1287 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TRIM68Q6AZZ1 485 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 FRMD7Q6ZUT3 714 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 NEK10Q6ZWH5 1172 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 USP43Q70EL4 1123 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ILDR2Q71H61 639 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MMAAQ8IVH4 418 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 GALNT6Q8NCL4 622 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TBCKQ8TEA7 893 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 SEMA4DQ92854 862 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 YIPF6Q96EC8 236 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 SP140LQ9H930 580 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TRPC7Q9HCX4 862 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 GOPCQ9HD26 462 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 VTA1Q9NP79 307 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TMEM181Q9P2C4 612 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ENPP5Q9UJA9 477 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 GPC6Q9Y625 555 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 CYP2D7A0A087X1C5 515 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TCAF2A6NFQ2 919 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PRR5-ARHGAP8B1AHC4 643 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 G3V2L1 256 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 HOXC11O43248 304 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 FAM157BP0CG42 384 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MYL6BP14649 208 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 NUDT1P36639 197 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 SREBF1P36956 1147 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PXNP49023 591 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 TAS2R40P59535 323 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PSMC6P62333 389 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ARHGAP8P85298 464 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 GTF2BQ00403 316 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 CEACAM7Q14002 265 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ABCB5Q2M3G0 1257 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ANKRD22Q5VYY1 191 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 LMBRD2Q68DH5 695 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 SLC39A4Q6P5W5 647 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 LRRC8BQ6P9F7 803 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 IGFN1Q86VF2 1251 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 CAND1Q86VP6 1230 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 ZNF677Q86XU0 584 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PTRH1Q86Y79 214 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 RIMKLAQ8IXN7 391 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 UNC5BQ8IZJ1 945 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MCOLN2Q8IZK6 566 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PIK3C3Q8NEB9 887 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 OR7G1Q8NGA0 311 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 SMG7Q92540 1137 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 SLC5A5Q92911 643 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 BHMTQ93088 406 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 NMD3Q96D46 503 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 FHDC1Q9C0D6 1143 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 MMRN2Q9H8L6 949 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 AGPAT4Q9NRZ5 378 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MCM9Q9NXL9 1143 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 SEL1LQ9UBV2 794 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MTRF1LQ9UGC7 380 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 INPP5FQ9Y2H2 1132 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PCDHB4Q9Y5E5 795 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PCDHGA7Q9Y5G6 932 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PABPN1LA6NDY0 278 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 CDK2AP1O14519 115 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 ZC3H11AO75152 810 aaKnown RBP eCLIP4.24□□□□□ -1.739e-6■■■■□ 20.6
USP16-205ENST00000474835 SIN3BO75182 1162 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 RNASEH2AO75792 299 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms