RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ZSWIM3Q96MP5 696 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 SLC22A12Q96S37 553 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 TBCBQ99426 244 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 CNPY3Q9BT09 278 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 IRX2Q9BZI1 471 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-206ENST00000474648 WDR6Q9NNW5 1121 aaKnown RBP10.45□□□□□ -0.74
COL8A1-206ENST00000474648 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 SFMBT1Q9UHJ3 866 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 GRID2IPA4D2P6 1211 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 SOBPA7XYQ1 873 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 CCP110O43303 1012 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 TRUB2O95900 331 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 CEBPBP17676 345 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 HDCP19113 662 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 PSMA2P25787 234 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 SDC4P31431 198 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 ATXN1P54253 815 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 HDAC4P56524 1084 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 ATP11AP98196 1134 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 EFEMP1Q12805 493 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 PIGHQ14442 188 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 MESDQ14696 234 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 CLUL1Q15846 466 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 ARHGAP29Q52LW3 1261 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 C10orf120Q5SQS8 335 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 EP400NLQ6ZTU2 488 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 TAC4Q86UU9 113 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 ARL14EPQ8N8R7 260 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 SMRP1Q8NCR6 262 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 RNF139Q8WU17 664 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 SUSD6Q92537 303 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 MRPS31Q92665 395 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 TRIM62Q9BVG3 475 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 KLF16Q9BXK1 252 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 SMOC2Q9H3U7 446 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 GOLPH3Q9H4A6 298 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 TASP1Q9H6P5 420 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 UBE2ZQ9H832 354 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 OLA1Q9NTK5 396 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 RRN3Q9NYV6 651 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 MRPS23Q9Y3D9 190 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 ALG6Q9Y672 507 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 CAPN6Q9Y6Q1 641 aa10.44□□□□□ -0.74
COL8A1-206ENST00000474648 MTCL1Q9Y4B5 1905 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 SPTBN5Q9NRC6 3674 aaKnown RBP10.44□□□□□ -0.74
COL8A1-206ENST00000474648 PATJQ8NI35 1801 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 H3BQ06 376 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 M0QYT0 321 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 LRCH4O75427 683 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 PALMO75781 387 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 TCF4P15884 667 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 PFKLP17858 780 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 COMTP21964 271 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 FSHRP23945 695 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 DDX6P26196 483 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 MAN1A1P33908 653 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ATP5C1P36542 298 aaKnown RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 CXCR3P49682 368 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 SULT1E1P49888 294 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 NAP1L1P55209 391 aaKnown RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 SLC7A9P82251 487 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ZXDBP98169 803 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ACAP1Q15027 740 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 GPR158Q5T848 1215 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 DAB2IPQ5VWQ8 1189 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 CES5AQ6NT32 575 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 CC2D1AQ6P1N0 951 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 RSRC2Q7L4I2 434 aaKnown RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 STRADAQ7RTN6 431 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 MAB21L3Q8N8X9 362 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ADAMTS19Q8TE59 1207 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 FAM172AQ8WUF8 416 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ING5Q8WYH8 240 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 WBP2Q969T9 261 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 SLC39A13Q96H72 371 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ZFRQ96KR1 1074 aaKnown RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 CDK5RAP1Q96SZ6 601 aaKnown RBP10.43□□□□□ -0.74
COL8A1-206ENST00000474648 ANLNQ9NQW6 1124 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 GKN1Q9NS71 199 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 PIGVQ9NUD9 493 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 MARCH2Q9P0N8 246 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 LCMT1Q9UIC8 334 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 CD207Q9UJ71 328 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 STAP1Q9ULZ2 295 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 HYOU1Q9Y4L1 999 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 GREB1Q4ZG55 1949 aa10.43□□□□□ -0.74
COL8A1-206ENST00000474648 REV3LO60673 3130 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 CLUHO75153 1309 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TRAV19A0A0A6YYK7 116 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms