RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SLC1A1P43005 524 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 PGFP49763 221 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 DNA2P51530 1060 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 EPHA5P54756 1037 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 PITX1P78337 314 aaPredicted RBP8.69□□□□□ -1.02
CNN3-205ENST00000474409 NTHL1P78549 312 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 ADAM15Q13444 863 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 HADHQ16836 314 aaKnown RBP8.69□□□□□ -1.02
CNN3-205ENST00000474409 SLC5A9Q2M3M2 681 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 ODF2Q5BJF6 829 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 GPR158Q5T848 1215 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 SNX30Q5VWJ9 437 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 MSANTD2Q6P1R3 559 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 GAREM2Q75VX8 874 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 GET4Q7L5D6 327 aaPredicted RBP8.69□□□□□ -1.02
CNN3-205ENST00000474409 STRADAQ7RTN6 431 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 MIB1Q86YT6 1006 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 DEFB123Q8N688 67 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 SHKBP1Q8TBC3 707 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 ING5Q8WYH8 240 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 PABPC5Q96DU9 382 aaKnown RBP8.69□□□□□ -1.02
CNN3-205ENST00000474409 NPY6RQ99463 290 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 NCAPGQ9BPX3 1015 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 SFMBT1Q9UHJ3 866 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
CNN3-205ENST00000474409 MRPS23Q9Y3D9 190 aaKnown RBP8.69□□□□□ -1.02
CNN3-205ENST00000474409 CLUHO75153 1309 aa8.69□□□□□ -1.02
CNN3-205ENST00000474409 SZT2Q5T011 3432 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 COL4A2P08572 1712 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 SLC12A8A0AV02 714 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 COCHO43405 550 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 PSTPIP1O43586 416 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 F9P00740 461 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 OAS1P00973 400 aaKnown RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 APOEP02649 317 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 HMBSP08397 361 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CEBPBP17676 345 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 PFKLP17858 780 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 AVPR1AP37288 418 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CCR2P41597 374 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 HDAC4P56524 1084 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 TBX4P57082 545 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 ITIH3Q06033 890 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 TEAD2Q15562 447 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CCDC85BQ15834 202 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 CLUL1Q15846 466 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 SMTNL2Q2TAL5 461 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 STXBP5Q5T5C0 1151 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 OTUD1Q5VV17 481 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 TXNDC8Q6A555 127 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CC2D1AQ6P1N0 951 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 SCYL2Q6P3W7 929 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 SYCE2Q6PIF2 218 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 GPR149Q86SP6 731 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 TMEM150AQ86TG1 271 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 FAM131BQ86XD5 332 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CPNE8Q86YQ8 564 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 UBL4BQ8N7F7 174 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 MAB21L3Q8N8X9 362 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 TTC16Q8NEE8 873 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 TCEAL4Q96EI5 215 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 PGAP3Q96FM1 320 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 RIPOR3Q96MK2 946 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 GUCD1Q96NT3 240 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CDX2Q99626 313 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 NAPGQ99747 312 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 LRRC3Q9BY71 257 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 ZWILCHQ9H900 591 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 PIGVQ9NUD9 493 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNN3-205ENST00000474409 PCSK1NQ9UHG2 260 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 DNAI1Q9UI46 699 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 PACSIN2Q9UNF0 486 aaPredicted RBP8.68□□□□□ -1.02
CNN3-205ENST00000474409 ALG6Q9Y672 507 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 ATG2BQ96BY7 2078 aa8.68□□□□□ -1.02
CNN3-205ENST00000474409 CTAGE9A4FU28 777 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 MIF4GDA9UHW6 222 aaKnown RBP8.67□□□□□ -1.02
CNN3-205ENST00000474409 ENC1O14682 589 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 PAPLNO95428 1278 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 TBX18O95935 607 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 MOCS2O96007 188 aaPredicted RBP8.67□□□□□ -1.02
CNN3-205ENST00000474409 IGLV3-25P01717 112 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 KRT1P04264 644 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 TUBB4AP04350 444 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 KRT7P08729 469 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 IRF1P10914 325 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 SLC2A3P11169 496 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 HDCP19113 662 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 FSHRP23945 695 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 MIPP30301 263 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 CASQ1P31415 396 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 CCR1P32246 355 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 PCK1P35558 622 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 MTHFRP42898 656 aa8.67□□□□□ -1.02
CNN3-205ENST00000474409 KPNA1P52294 538 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms