RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 GNSP15586 552 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 CASP1P29466 404 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 ASPAP45381 313 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 PLA2G4AP47712 749 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 NDST1P52848 882 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 COPAP53621 1224 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 AP3M2P53677 418 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 MFAP3P55082 362 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 MAP3K7CLP57077 242 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 DLG4P78352 724 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 CAMK2BQ13554 666 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 GEN1Q17RS7 908 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 KNOP1Q1ED39 458 aaKnown RBP13.97□□□□□ -0.17
GAPDH-208ENST00000474249 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 ZACNQ401N2 412 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 ZNF667Q5HYK9 610 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 C1orf220Q5T0J3 134 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 TMPRSS7Q7RTY8 843 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 UNC93AQ86WB7 457 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 RGL4Q8IZJ4 473 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 BBC3Q96PG8 261 aaPredicted RBP13.97□□□□□ -0.17
GAPDH-208ENST00000474249 TWNKQ96RR1 684 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 HNRNPABQ99729 332 aaKnown RBP13.97□□□□□ -0.17
GAPDH-208ENST00000474249 PRDM16Q9HAZ2 1276 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 PLK2Q9NYY3 685 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 USP3Q9Y6I4 520 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 FLNBO75369 2602 aaKnown RBP13.97□□□□□ -0.17
GAPDH-208ENST00000474249 CKAP5Q14008 2032 aa13.97□□□□□ -0.17
GAPDH-208ENST00000474249 MDM4O15151 490 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 PPP6R2O75170 966 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 NDUFS2O75306 463 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 IL12RB1P42701 662 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 TPMTP51580 245 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 KIF11P52732 1056 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 ASIC1P78348 528 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 AMPD3Q01432 767 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 INCA1Q0VD86 236 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 ORC1Q13415 861 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 COL28A1Q2UY09 1125 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 SLC9A9Q8IVB4 645 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 MDM1Q8TC05 714 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 NACA2Q9H009 215 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 CCDC86Q9H6F5 360 aaKnown RBP13.96□□□□□ -0.17
GAPDH-208ENST00000474249 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 NUDT5Q9UKK9 219 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 CLEC4EQ9ULY5 219 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 FNDC3AQ9Y2H6 1198 aaKnown RBP13.96□□□□□ -0.17
GAPDH-208ENST00000474249 PCDHGB2Q9Y5G2 931 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 SLCO1B1Q9Y6L6 691 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 KNTC1P50748 2209 aa13.96□□□□□ -0.17
GAPDH-208ENST00000474249 GOLGA4Q13439 2230 aaKnown RBP13.96□□□□□ -0.17
GAPDH-208ENST00000474249 NUMA1Q14980 2115 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 PVALEFA0A1B0GWK0 134 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 A0A1W2PQH9 124 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 NPC1O15118 1278 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 SPTLC2O15270 562 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 ZBTB24O43167 697 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 EXOC3O60645 756 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 PHACTR2O75167 634 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 ASS1P00966 412 aaKnown RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 NCAM1P13591 858 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 RARGP13631 454 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 MCCD1P59942 119 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 HLA-BQ31612 363 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 TMEM215Q68D42 235 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 SCARA5Q6ZMJ2 495 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 TMPRSS6Q8IU80 811 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 IQUBQ8NA54 791 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 DHX58Q96C10 678 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 GPR174Q9BXC1 333 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 ZSCAN16Q9H4T2 348 aaPredicted RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 GAREM1Q9H706 876 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.95□□□□□ -0.187e-8■■■■■ 81.1
GAPDH-208ENST00000474249 FAM49BQ9NUQ9 324 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 TFIP11Q9UBB9 837 aaKnown RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 DNMT3LQ9UJW3 386 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 APOBEC2Q9Y235 224 aaKnown RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 PCDHB9Q9Y5E1 797 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 ASH1LQ9NR48 2969 aaKnown RBP13.95□□□□□ -0.18
GAPDH-208ENST00000474249 MYH10P35580 1976 aa13.95□□□□□ -0.18
GAPDH-208ENST00000474249 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 BCAT2O15382 392 aaPredicted RBP13.94□□□□□ -0.18
GAPDH-208ENST00000474249 KLRC4O43908 158 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 CILPO75339 1184 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 ATXN1LP0C7T5 689 aaKnown RBP13.94□□□□□ -0.18
GAPDH-208ENST00000474249 DCAF12L1Q5VU92 463 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 KIAA1324Q6UXG2 1013 aaKnown RBP13.94□□□□□ -0.18
GAPDH-208ENST00000474249 SV2AQ7L0J3 742 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 CCDC186Q7Z3E2 898 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 FAM217AQ8IXS0 508 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
GAPDH-208ENST00000474249 TAF4BQ92750 862 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
GAPDH-208ENST00000474249 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
GAPDH-208ENST00000474249 TM7SF3Q9NS93 570 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms