RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 NCOA4Q13772 614 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 BMT2Q1RMZ1 405 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 KIF19Q2TAC6 998 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 HLA-BQ31612 363 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 CNNM4Q6P4Q7 775 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 TMPRSS7Q7RTY8 843 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 CRYBG2Q8N1P7 616 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 ZNF366Q8N895 744 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 LINC00301Q8NCQ3 95 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 ADAM32Q8TC27 787 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 DHX58Q96C10 678 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 C7orf25Q9BPX7 421 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 MIR1-1HGQ9H1L0 117 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 TNMDQ9H2S6 317 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 C6orf106Q9H6K1 298 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-223ENST00000473345 GAREM1Q9H706 876 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 PRDM16Q9HAZ2 1276 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 SLC39A2Q9NP94 309 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 DMAC2Q9NW81 257 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 THAP10Q9P2Z0 257 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-223ENST00000473345 SCML2Q9UQR0 700 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 MORC2Q9Y6X9 1032 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-223ENST00000473345 BPTFQ12830 3046 aa10.14□□□□□ -0.79
MCF2L-223ENST00000473345 ANKRD11Q6UB99 2663 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 A0A1B0GTW7 788 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 TRABD2BA6NFA1 517 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 GOLGA8CPA6NN73 597 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 CBX4O00257 560 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 GFRA2O00451 464 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 KLRC4O43908 158 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 IGLV3-19P01714 112 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 ATICP31939 592 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 ACSL1P33121 698 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 SGSHP51688 502 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 CYP4F3Q08477 520 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 TRPC3Q13507 836 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 CUL4BQ13620 913 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 ZNF234Q14588 700 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 PTPRNQ16849 979 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 BHLHA9Q7RTU4 235 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 METTL3Q86U44 580 aaKnown RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 FAM124AQ86V42 546 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 TMPRSS6Q8IU80 811 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 C12orf56Q8IXR9 622 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 SETD7Q8WTS6 366 aaKnown RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 NDRG1Q92597 394 aaKnown RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 FAM124BQ9H5Z6 455 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 TM7SF3Q9NS93 570 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 SLC27A6Q9Y2P4 619 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-223ENST00000473345 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 APC2O95996 2303 aa10.13□□□□□ -0.79
MCF2L-223ENST00000473345 MEI4A8MW99 385 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 BCAT2O15382 392 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 NDUFS2O75306 463 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 HMBSP08397 361 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 ITPKBP27987 946 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 ATP5C1P36542 298 aaKnown RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 TXLNAP40222 546 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 KIF11P52732 1056 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 IL9RQ01113 521 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 BIRC3Q13489 604 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 HNRNPDQ14103 355 aaKnown RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 ZACNQ401N2 412 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 ZNF667Q5HYK9 610 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 UNC13DQ70J99 1090 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 WFDC5Q8TCV5 224 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 SYAP1Q96A49 352 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 XPO6Q96QU8 1125 aaKnown RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 KCTD10Q9H3F6 313 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 MTG2Q9H4K7 406 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 CAAP1Q9H8G2 361 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 EBF2Q9HAK2 575 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 TLR8Q9NR97 1041 aaKnown RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 COMMD8Q9NX08 183 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 KIAA1522Q9P206 1035 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 WDR35Q9P2L0 1181 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 AGO1Q9UL18 857 aaKnown RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 R3HCC1Q9Y3T6 440 aaKnown RBP10.12□□□□□ -0.79
MCF2L-223ENST00000473345 PCDHB9Q9Y5E1 797 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 NUMA1Q14980 2115 aa10.12□□□□□ -0.79
MCF2L-223ENST00000473345 GCN1Q92616 2671 aaKnown RBP10.11□□□□□ -0.79
MCF2L-223ENST00000473345 TMEM131Q92545 1883 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 H0Y8X5 98 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 TULP2O00295 520 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 WNT9AO14904 365 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 PHACTR2O75167 634 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 ASS1P00966 412 aaKnown RBP10.11□□□□□ -0.79
MCF2L-223ENST00000473345 ZNF883P0CG24 379 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 C7P10643 843 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 INCA1Q0VD86 236 aa10.11□□□□□ -0.79
MCF2L-223ENST00000473345 STK4Q13043 487 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms