RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	HOXB2	P14652	356 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	HNRNPL	P14866	589 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	CD19	P15391	556 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	BCKDHB	P21953	392 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	NTSR1	P30989	418 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	CORO1A	P31146	461 aa	Known RBP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	CHKA	P35790	457 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	P2RY2	P41231	377 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	FMO5	P49326	533 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	DHPS	P49366	369 aa	Predicted RBP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	DGKG	P49619	791 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	TKTL1	P51854	596 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	YWHAG	P61981	247 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	BST2	Q10589	180 aa	Known RBP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	LRMP	Q12912	555 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	RAB41	Q5JT25	222 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	STPG1	Q5TH74	334 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	TCEAL6	Q6IPX3	200 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	SDE2	Q6IQ49	451 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	KLHL10	Q6JEL2	608 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	LPCAT2	Q7L5N7	544 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	ELOA2	Q8IYF1	753 aa	Predicted RBP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	CHPF	Q8IZ52	775 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	BHMT	Q93088	406 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	TCEAL3	Q969E4	200 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	IPO9	Q96P70	1041 aa	Known RBP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	EDEM2	Q9BV94	578 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	DCLK3	Q9C098	648 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	LRRC4	Q9HBW1	653 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	OLA1	Q9NTK5	396 aa	Known RBP	9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	MARCH2	Q9P0N8	246 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	MAN1B1	Q9UKM7	699 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	TSPAN16	Q9UKR8	245 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	STARD13	Q9Y3M8	1113 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	PLXND1	Q9Y4D7	1925 aa		9.36	□□□□□ -0.91
CHEK2-223	ENST00000472807	TRIM24	O15164	1050 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	HMBS	P08397	361 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	SETSIP	P0DME0	302 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	VDR	P11473	427 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	CACNA1B	Q00975	2339 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	PDE4C	Q08493	712 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	ADIG	Q0VDE8	80 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	EGFLAM	Q63HQ2	1017 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	RNF43	Q68DV7	783 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	ISM2	Q6H9L7	571 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	TMEM270	Q6UE05	265 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	TOGARAM2	Q6ZUX3	1019 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	SIX6OS1	Q8N1H7	587 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	RNF139	Q8WU17	664 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	NELFB	Q8WX92	580 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	RLN3	Q8WXF3	142 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	PLD4	Q96BZ4	506 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	NT5C1B	Q96P26	610 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	ULBP1	Q9BZM6	244 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	RXFP3	Q9NSD7	469 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	PLK2	Q9NYY3	685 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	KIAA1257	Q9ULG3	409 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	CTNND2	Q9UQB3	1225 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	ASPM	Q8IZT6	3477 aa		9.35	□□□□□ -0.91
CHEK2-223	ENST00000472807	SLC12A8	A0AV02	714 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	LNP1	A1A4G5	178 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	TULP2	O00295	520 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807		O00370	1275 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	KHNYN	O15037	678 aa	Known RBP	9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PMM2	O15305	246 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	P4HA2	O15460	535 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	AP5Z1	O43299	807 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	GNA14	O95837	355 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PENK	P01210	267 aa	Predicted RBP	9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	CYBB	P04839	570 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	ADRB1	P08588	477 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PAEP	P09466	180 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	GABRG2	P18507	467 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	DPP6	P42658	865 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	WAS	P42768	502 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	HARS2	P49590	506 aa	Known RBP	9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	STARD3	Q14849	445 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	STIL	Q15468	1287 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	MAP7D1	Q3KQU3	841 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	SPDYC	Q5MJ68	293 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	LYSMD4	Q5XG99	296 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PM20D1	Q6GTS8	502 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	TTI2	Q6NXR4	508 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	FOXR2	Q6PJQ5	311 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	SLC36A4	Q6YBV0	504 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	DENND1C	Q8IV53	801 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PPM1K	Q8N3J5	372 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	UBR7	Q8N806	425 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PIGK	Q92643	395 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	GABRG3	Q99928	467 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	CALCOCO1	Q9P1Z2	691 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	AGO1	Q9UL18	857 aa	Known RBP	9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PCDHB4	Q9Y5E5	795 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	PI4KA	P42356	2102 aa		9.34	□□□□□ -0.91
CHEK2-223	ENST00000472807	MAP1B	P46821	2468 aa	Known RBP	9.33	□□□□□ -0.92
CHEK2-223	ENST00000472807	FRY	Q5TBA9	3013 aa		9.33	□□□□□ -0.92
CHEK2-223	ENST00000472807	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		9.33	□□□□□ -0.92
CHEK2-223	ENST00000472807		A0A1W2PQF6	199 aa		9.33	□□□□□ -0.92
CHEK2-223	ENST00000472807	PPP1R3G	B7ZBB8	358 aa		9.33	□□□□□ -0.92
CHEK2-223	ENST00000472807	PRRT4	C9JH25	899 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms