RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 STRADAQ7RTN6 431 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 PIGWQ7Z7B1 504 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 ACOT1Q86TX2 421 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 ARFGAP1Q8N6T3 406 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 C7orf31Q8N865 590 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 FAM172AQ8WUF8 416 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SLC35F5Q8WV83 523 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 APBB2Q92870 758 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 ACSF2Q96CM8 615 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 MAGEB18Q96M61 343 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 APBA2Q99767 749 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 MRPL45Q9BRJ2 306 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 KLC2Q9H0B6 622 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SPC25Q9HBM1 224 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 NGRNQ9NPE2 291 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 DNAJC17Q9NVM6 304 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 RCOR3Q9P2K3 495 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 TJP2Q9UDY2 1190 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 XPO7Q9UIA9 1087 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 IKBKGQ9Y6K9 419 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 CITO14578 2027 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 KAT6AQ92794 2004 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 IQANK1A0A1B0GTG1 560 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SMIM28A0A1B0GU29 152 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ARHGEF37A1IGU5 675 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CCT8L1PA6NM43 557 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 HACD1B0YJ81 288 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 XPO1O14980 1071 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 STK10O94804 968 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ZWINTO95229 277 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 PFKMP08237 780 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 FBXO45P0C2W1 286 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ZSCAN5DPP0CG00 497 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ZNF865P0CJ78 1059 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 AKR1A1P14550 325 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 LRPAP1P30533 357 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ARL4AP40617 200 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 MSH2P43246 934 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SCTRP47872 440 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 RPL34P49207 117 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 RGS7P49802 495 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 AIF1P55008 147 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ADAM17P78536 824 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SARNPP82979 210 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SRSF11Q05519 484 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ACTN3Q08043 901 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 PDE4CQ08493 712 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 POU4F2Q12837 409 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CDO1Q16878 200 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CCDC142Q17RM4 750 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SOWAHAQ2M3V2 549 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ANKRD20A8PQ5CZ79 823 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 LGSNQ5TDP6 509 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SLC9A4Q6AI14 798 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 VSTM1Q6UX27 236 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 PDZD4Q76G19 769 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 TRABD2AQ86V40 505 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 TTC30AQ86WT1 665 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 SRRM1Q8IYB3 904 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 LRRC34Q8IZ02 419 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ANKRD42Q8N9B4 389 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 DNAJB3Q8WWF6 145 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CPT1BQ92523 772 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 MAML1Q92585 1016 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 KAT2BQ92831 832 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 FAF2Q96CS3 445 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 LRRC39Q96DD0 335 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 RTP4Q96DX8 246 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CYTH2Q99418 400 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 APOL6Q9BWW8 343 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 EIF2AQ9BY44 585 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 TRABDQ9H4I3 376 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 ZFYVE28Q9HCC9 887 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 LRRC4CQ9HCJ2 640 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CHST12Q9NRB3 414 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 EURLQ9NYK6 297 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 TUBGCP4Q9UGJ1 667 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CPA4Q9UI42 421 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 STAP1Q9ULZ2 295 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 USP15Q9Y4E8 981 aaPredicted RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 PCDHB9Q9Y5E1 797 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.93□□□□□ -1.14
CCDC171-205ENST00000472806 CLUHO75153 1309 aa7.93□□□□□ -1.14
CCDC171-205ENST00000472806 A0A1W2PRU2 124 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 POC1B-GALNT4F8VUJ3 575 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TRDMT1O14717 391 aaKnown RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 PAPSS1O43252 624 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 DAB1O75553 588 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 FBXO21O94952 628 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ETS1P14921 441 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 IFNAR2P48551 515 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 LHX1P48742 406 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 LIG3P49916 1009 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ZNF135P52742 658 aaPredicted RBP7.92□□□□□ -1.14
CCDC171-205ENST00000472806 ATP11AP98196 1134 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 TMEM62Q0P6H9 643 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 DPYSL2Q16555 572 aa7.92□□□□□ -1.14
CCDC171-205ENST00000472806 FSCN1Q16658 493 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms