RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PIF1Q9H611 641 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 TBC1D17Q9HA65 648 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 IFT122Q9HBG6 1241 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 KCNMB3Q9NPA1 279 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 TOPORSQ9NS56 1045 aaPredicted RBP3.85□□□□□ -1.79
XRN1-209ENST00000472625 GDE1Q9NZC3 331 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 HSPBP1Q9NZL4 362 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 VPS54Q9P1Q0 977 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 NCDNQ9UBB6 729 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 KCNG1Q9UIX4 513 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 GMEB2Q9UKD1 530 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 ADAM28Q9UKQ2 775 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 CDH7Q9ULB5 785 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 RAB23Q9ULC3 237 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 PRG3Q9Y2Y8 225 aaPredicted RBP3.85□□□□□ -1.79
XRN1-209ENST00000472625 IPPQ9Y573 584 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 DUSP10Q9Y6W6 482 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 KIAA1671Q9BY89 1806 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 CACNA1AO00555 2505 aa3.85□□□□□ -1.79
XRN1-209ENST00000472625 DMXL1Q9Y485 3027 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 GVINP1Q7Z2Y8 2422 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 FNDC1Q4ZHG4 1894 aaPredicted RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 LOXHD1Q8IVV2 1947 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TRBV23-1A0A0A0MS06 115 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 KANSL1LA0AUZ9 987 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ANHXE9PGG2 379 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TMEM189-UBE2V1I3L0A0 370 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 AGRPO00253 132 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 MAN2B1O00754 1011 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TGM5O43548 720 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TBC1D4O60343 1298 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 NEMFO60524 1076 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 CCNT1O60563 726 aaKnown RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 TSPAN1O60635 241 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 LRP3O75074 770 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TADA2AO75478 443 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ECI2O75521 394 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TDP2O95551 362 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 LTFP02788 710 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 AMY2AP04746 511 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SRGAP2CP0DJJ0 459 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 XRCC6P12956 609 aaKnown RBP eCLIP3.84□□□□□ -1.79
XRN1-209ENST00000472625 LAMP2P13473 410 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 AMY2BP19961 511 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 MUTP22033 750 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SCP2P22307 547 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 FGFR4P22455 802 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 GRK2P25098 689 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 PDIA3P30101 505 aaKnown RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 GRK3P35626 688 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 RPS9P46781 194 aaKnown RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 SCNN1GP51170 649 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 EFNA5P52803 228 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ITGA1P56199 1179 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 STARD6P59095 220 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 PLP2Q04941 152 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 DRP2Q13474 957 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SQSTM1Q13501 440 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 HTR4Q13639 388 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SAFBQ15424 915 aaKnown RBP eCLIP3.84□□□□□ -1.79
XRN1-209ENST00000472625 MLF2Q15773 248 aaPredicted RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 PSMD5Q16401 504 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 MAPK6Q16659 721 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 UGCGQ16739 394 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 XKR9Q5GH70 373 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 PPM1LQ5SGD2 360 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ZBTB41Q5SVQ8 909 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 PLA2G4FQ68DD2 849 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 NCAPH2Q6IBW4 605 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ZNF852Q6ZMS4 543 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 RUFY3Q7L099 469 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 MILR1Q7Z6M3 343 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 GGNQ86UU5 652 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ZNF280BQ86YH2 543 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SCUBE1Q8IWY4 988 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 RBM12BQ8IXT5 1001 aaKnown RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 COLGALT2Q8IYK4 626 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 C12orf76Q8N812 135 aaPredicted RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 UHMK1Q8TAS1 419 aaKnown RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.84□□□□□ -1.79
XRN1-209ENST00000472625 SLC7A14Q8TBB6 771 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 AUTS2Q8WXX7 1259 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 RIN2Q8WYP3 895 aaPredicted RBP3.84□□□□□ -1.79
XRN1-209ENST00000472625 LPPQ93052 612 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 EXOC4Q96A65 974 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 E2F7Q96AV8 911 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TCEANC2Q96MN5 208 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 RAB34Q9BZG1 259 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 TM6SF1Q9BZW5 370 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 NT5C3AQ9H0P0 336 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 OSBPL2Q9H1P3 480 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SLC6A20Q9NP91 592 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ANKEF1Q9NU02 776 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 SLC38A7Q9NVC3 462 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ZSCAN32Q9NX65 697 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 ASH2LQ9UBL3 628 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 DNAJB4Q9UDY4 337 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 FBXW11Q9UKB1 542 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 CA14Q9ULX7 337 aa3.84□□□□□ -1.79
XRN1-209ENST00000472625 MAFFQ9ULX9 164 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms