RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	NPNT	Q6UXI9	565 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	BNIPL	Q7Z465	357 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DDX53	Q86TM3	631 aa	Known RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	VPS52	Q8N1B4	723 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TTC13	Q8NBP0	860 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ACTL9	Q8TC94	416 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DQX1	Q8TE96	717 aa	Known RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RNF139	Q8WU17	664 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	C2orf15	Q8WU43	125 aa	Known RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FBXO32	Q969P5	355 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CLSTN3	Q9BQT9	956 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FAM114A2	Q9NRY5	505 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ABCC13	Q9NSE7	274 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GMIP	Q9P107	970 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ASIC3	Q9UHC3	531 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	NUDT5	Q9UKK9	219 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SCML2	Q9UQR0	700 aa		11.19	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ZNF638	Q14966	1978 aa	Known RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	APOL1	O14791	398 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CREB3	O43889	395 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RTN3	O95197	1032 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GAS8	O95995	478 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	F9	P00740	461 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PECAM1	P16284	738 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	IL4R	P24394	825 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GBP1	P32455	592 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PPM1A	P35813	382 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ARL4A	P40617	200 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	VPS41	P49754	854 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	VCP	P55072	806 aa	Known RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	EFHC2	Q5JST6	749 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	DENND5B	Q6ZUT9	1274 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PCDH19	Q8TAB3	1148 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	AEN	Q8WTP8	325 aa	Known RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ZNF670	Q9BS34	389 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	C10orf88	Q9H8K7	445 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	WDR6	Q9NNW5	1121 aa	Known RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	MTMR10	Q9NXD2	777 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SFMBT1	Q9UHJ3	866 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FBXW11	Q9UKB1	542 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SLC4A7	Q9Y6M7	1214 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PLXNA3	P51805	1871 aa		11.18	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GREB1	Q4ZG55	1949 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CARNS1	A5YM72	827 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SLC38A8	A6NNN8	435 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	APOC4-APOC2	K7ER74	178 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FGF18	O76093	207 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CSPG5	O95196	566 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	KRT14	P02533	472 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	APOC2	P02655	101 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FAM153B	P0C7A2	387 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	GOT1	P17174	413 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ADRA1B	P35368	520 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	RPL21	P46778	160 aa	Known RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	EIF3E	P60228	445 aa	Known RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HTRA4	P83105	476 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	LMNB2	Q03252	620 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ARL13B	Q3SXY8	428 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FAM153C	Q494X1	144 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	B4GALNT4	Q76KP1	1039 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HDX	Q7Z353	690 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PRUNE1	Q86TP1	453 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	MON1A	Q86VX9	555 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HERC6	Q8IVU3	1022 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ARHGAP18	Q8N392	663 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PQLC3	Q8N755	202 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FAM71B	Q8TC56	605 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	P3H4	Q92791	437 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CASP10	Q92851	521 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SLCO2A1	Q92959	643 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ZBTB9	Q96C00	473 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	PGAP3	Q96FM1	320 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SPATA17	Q96L03	361 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CSPG4P5	Q96PW8	444 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TMEM121	Q9BTD3	319 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TKTL2	Q9H0I9	626 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	NEUROG2	Q9H2A3	272 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	WDCP	Q9H6R7	721 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CYP4F11	Q9HBI6	524 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	OSER1	Q9NX31	292 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	CWC15	Q9P013	229 aa	Known RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	AFF4	Q9UHB7	1163 aa	Known RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	FAM153A	Q9UHL3	310 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	INSL6	Q9Y581	213 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	HEY1	Q9Y5J3	304 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267		H3BRJ5	948 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267		H7C0C1	242 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SGK1	O00141	431 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	MCF2L	O15068	1137 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	MSI1	O43347	362 aa	Known RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	TLL1	O43897	1013 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SASH3	O75995	380 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	SEC24A	O95486	1093 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ATP2A2	P16615	1042 aa	Known RBP	11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	ATF6	P18850	670 aa		11.17	□□□□□ -0.62
MRPS18B-208	ENST00000472267	AMPD1	P23109	780 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms