RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TSPAN16Q9UKR8 245 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 NUP205Q92621 2012 aa23.64■■□□□ 1.38
C9orf3-213ENST00000471978 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 LNP1A1A4G5 178 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 TULP2O00295 520 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 ZBED1O96006 694 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 CISD3P0C7P0 127 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 CD19P15391 556 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 GABRG2P18507 467 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 CORO1AP31146 461 aaKnown RBP23.64■■□□□ 1.37
C9orf3-213ENST00000471978 PDE4CQ08493 712 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 TMEFF1Q8IYR6 380 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 CNTNAP3BQ96NU0 1288 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 CNTNAP3Q9BZ76 1288 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 METTL14Q9HCE5 456 aaKnown RBP23.64■■□□□ 1.37
C9orf3-213ENST00000471978 MARCH2Q9P0N8 246 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 HESX1Q9UBX0 185 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 STRIP2Q9ULQ0 834 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 TPRP12270 2363 aaKnown RBP23.64■■□□□ 1.37
C9orf3-213ENST00000471978 ACACBO00763 2458 aa23.64■■□□□ 1.37
C9orf3-213ENST00000471978 A0A1W2PQF6 199 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 PATE3B3GLJ2 98 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 XPO1O14980 1071 aaKnown RBP23.63■■□□□ 1.37
C9orf3-213ENST00000471978 ZBTB24O43167 697 aaPredicted RBP23.63■■□□□ 1.37
C9orf3-213ENST00000471978 CHKAP35790 457 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 BCAT1P54687 386 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 PM20D1Q6GTS8 502 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 ARMCX6Q7L4S7 300 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 ELOA2Q8IYF1 753 aaPredicted RBP23.63■■□□□ 1.37
C9orf3-213ENST00000471978 P2RY11Q96G91 374 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 CEP63Q96MT8 703 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 LSM14BQ9BX40 385 aaKnown RBP23.63■■□□□ 1.37
C9orf3-213ENST00000471978 ULBP1Q9BZM6 244 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 FBXO10Q9UK96 956 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 MAN1B1Q9UKM7 699 aa23.63■■□□□ 1.37
C9orf3-213ENST00000471978 AGO1Q9UL18 857 aaKnown RBP23.63■■□□□ 1.37
C9orf3-213ENST00000471978 CHD8Q9HCK8 2581 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 SLC12A8A0AV02 714 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 C4orf47A7E2U8 309 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 CD44P16070 742 aaKnown RBP23.62■■□□□ 1.37
C9orf3-213ENST00000471978 TBXAS1P24557 533 aaPredicted RBP23.62■■□□□ 1.37
C9orf3-213ENST00000471978 PTGER3P43115 390 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 FMO5P49326 533 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 BST2Q10589 180 aaKnown RBP23.62■■□□□ 1.37
C9orf3-213ENST00000471978 CCDC40Q4G0X9 1142 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 FYB2Q5VWT5 728 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 DENND1CQ8IV53 801 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 UBR7Q8N806 425 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 UBA3Q8TBC4 463 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 NDRG1Q92597 394 aaKnown RBP23.62■■□□□ 1.37
C9orf3-213ENST00000471978 ERLEC1Q96DZ1 483 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 LRRC4Q9HBW1 653 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 CALCOCO1Q9P1Z2 691 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 KIAA1257Q9ULG3 409 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 EPG5Q9HCE0 2579 aa23.62■■□□□ 1.37
C9orf3-213ENST00000471978 PENKP01210 267 aaPredicted RBP23.61■■□□□ 1.37
C9orf3-213ENST00000471978 VDRP11473 427 aa23.61■■□□□ 1.37
C9orf3-213ENST00000471978 PPP1R2P41236 205 aa23.61■■□□□ 1.37
C9orf3-213ENST00000471978 SPDYCQ5MJ68 293 aa23.61■■□□□ 1.37
C9orf3-213ENST00000471978 IPO4Q8TEX9 1081 aaKnown RBP23.61■■□□□ 1.37
C9orf3-213ENST00000471978 IPO9Q96P70 1041 aaKnown RBP23.61■■□□□ 1.37
C9orf3-213ENST00000471978 GABRG3Q99928 467 aa23.61■■□□□ 1.37
C9orf3-213ENST00000471978 CACNA2D2Q9NY47 1150 aa23.61■■□□□ 1.37
C9orf3-213ENST00000471978 IRX4P78413 519 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 ADIGQ0VDE8 80 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 LYSMD4Q5XG99 296 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 KLHL10Q6JEL2 608 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 KIAA1211LQ6NV74 962 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 BHLHA9Q7RTU4 235 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 SYT12Q8IV01 421 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 NT5C1BQ96P26 610 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 CD248Q9HCU0 757 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 TMEM9BQ9NQ34 198 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 SLC27A6Q9Y2P4 619 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 RAD54BQ9Y620 910 aa23.6■■□□□ 1.37
C9orf3-213ENST00000471978 PLXND1Q9Y4D7 1925 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 O00370 1275 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 PMM2O15305 246 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 AP5Z1O43299 807 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 KCNK5O95279 499 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 CYBBP04839 570 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 SETSIPP0DME0 302 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 NDUFV2P19404 249 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 RPL6Q02878 288 aaKnown RBP23.59■■□□□ 1.37
C9orf3-213ENST00000471978 N4BP2L1Q5TBK1 243 aaPredicted RBP23.59■■□□□ 1.37
C9orf3-213ENST00000471978 DAB2IPQ5VWQ8 1189 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 TMEM270Q6UE05 265 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 SLC36A4Q6YBV0 504 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 FMNL3Q8IVF7 1028 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 SIX6OS1Q8N1H7 587 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 PLD4Q96BZ4 506 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 OLA1Q9NTK5 396 aaKnown RBP23.59■■□□□ 1.37
C9orf3-213ENST00000471978 TMEM74BQ9NUR3 256 aa23.59■■□□□ 1.37
C9orf3-213ENST00000471978 EVLQ9UI08 416 aaPredicted RBP23.59■■□□□ 1.37
C9orf3-213ENST00000471978 PPP1R3GB7ZBB8 358 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 WASH3PC4AMC7 463 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 GFRA2O00451 464 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 ZNF217O75362 1048 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 PAEPP09466 180 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 BMP6P22004 513 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms