RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PCDHGB6Q9Y5F9 930 aa4.53□□□□□ -1.68
RBM39-228ENST00000471635 CCDC187A0A096LP49 1063 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 C2CD4BA6NLJ0 364 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 B4DGG1 531 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 F8W8V4 182 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 CRYABP02511 175 aaKnown RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 MBPP02686 304 aaPredicted RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 ALPLP05186 524 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 TMIGD3P0DMS9 266 aaPredicted RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 CCKARP32238 428 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 WDR5P61964 334 aaKnown RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 RAE1P78406 368 aaKnown RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 CHST15Q7LFX5 561 aaPredicted RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 TRMT61AQ96FX7 289 aaKnown RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 ZDHHC12Q96GR4 267 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 FAM234AQ9H0X4 552 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 SLC25A32Q9H2D1 315 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 MLXIPLQ9NP71 852 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 CAPN11Q9UMQ6 739 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 VPS4AQ9UN37 437 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 SIRT4Q9Y6E7 314 aaPredicted RBP4.52□□□□□ -1.69
RBM39-228ENST00000471635 COL15A1P39059 1388 aa4.52□□□□□ -1.69
RBM39-228ENST00000471635 TSPAN6O43657 245 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 TULP3O75386 442 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 PLAUP00749 431 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 HRGP04196 525 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 CD63P08962 238 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 HTR6P50406 440 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 MTAPQ13126 283 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 FHL3Q13643 280 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 RRAGBQ5VZM2 374 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 RNF44Q7L0R7 432 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 TFAP2DQ7Z6R9 452 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 MYO1HQ8N1T3 1032 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 SDR16C5Q8N3Y7 309 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.51□□□□□ -1.69
RBM39-228ENST00000471635 MBD3L2Q8NHZ7 208 aaPredicted RBP4.51□□□□□ -1.69
RBM39-228ENST00000471635 WIPF2Q8TF74 440 aaPredicted RBP4.51□□□□□ -1.69
RBM39-228ENST00000471635 FAM227BQ96M60 508 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 FCRL5Q96RD9 977 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 APOL5Q9BWW9 433 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 G3BP2Q9UN86 482 aaKnown RBP4.51□□□□□ -1.69
RBM39-228ENST00000471635 PCDHB2Q9Y5E7 798 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 HEMK1Q9Y5R4 338 aaPredicted RBP4.51□□□□□ -1.69
RBM39-228ENST00000471635 SNX13Q9Y5W8 968 aa4.51□□□□□ -1.69
RBM39-228ENST00000471635 SPATA31A1Q5TZJ5 1347 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 GOLGA6CA6NDK9 693 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 GOLGA6BA6NDN3 693 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 C16orf96A6NNT2 1141 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 TOMM40O96008 361 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 ANXA2P07355 339 aaKnown RBP4.5□□□□□ -1.69
RBM39-228ENST00000471635 GOLGA6DP0CG33 693 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 PBX1P40424 430 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 SEMA5AQ13591 1074 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 DNASE1L3Q13609 305 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 GBX1Q14549 363 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 EARS2Q5JPH6 523 aaKnown RBP4.5□□□□□ -1.69
RBM39-228ENST00000471635 UBE2Q1Q7Z7E8 422 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 MMP21Q8N119 569 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 SUN3Q8TAQ9 357 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 PIGKQ92643 395 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 MARK4Q96L34 752 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 HEYLQ9NQ87 328 aaPredicted RBP4.5□□□□□ -1.69
RBM39-228ENST00000471635 ZBTB40Q9NUA8 1239 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 TMEM45AQ9NWC5 275 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 GOLGA6AQ9NYA3 693 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 SEMA5BQ9P283 1151 aa4.5□□□□□ -1.69
RBM39-228ENST00000471635 TTBK1Q5TCY1 1321 aaPredicted RBP4.49□□□□□ -1.69
RBM39-228ENST00000471635 SLC22A23A1A5C7 686 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 PRR23D1E9PI22 279 aaPredicted RBP4.49□□□□□ -1.69
RBM39-228ENST00000471635 PRR23D2P0DMB1 279 aaPredicted RBP4.49□□□□□ -1.69
RBM39-228ENST00000471635 ST6GAL1P15907 406 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 RHCEP18577 417 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 ATICP31939 592 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 THBS3P49746 956 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 VPS41P49754 854 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 RHDQ02161 417 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 MTA1Q13330 715 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 ACOX1Q15067 660 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 CNGA3Q16281 694 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 GFOD2Q3B7J2 385 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 AASDHQ4L235 1098 aaPredicted RBP4.49□□□□□ -1.69
RBM39-228ENST00000471635 MIDNQ504T8 468 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 KIAA1161Q6NSJ0 714 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 C9orf47Q6ZRZ4 202 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 ACRBPQ8NEB7 543 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 STRBPQ96SI9 672 aaKnown RBP4.49□□□□□ -1.69
RBM39-228ENST00000471635 BTBD1Q9H0C5 482 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 AGO4Q9HCK5 861 aaKnown RBP4.49□□□□□ -1.69
RBM39-228ENST00000471635 ABHD10Q9NUJ1 306 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
RBM39-228ENST00000471635 DRD1P21728 446 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 HOXA7P31268 230 aaPredicted RBP4.48□□□□□ -1.69
RBM39-228ENST00000471635 DGKQP52824 942 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 NANOS2P60321 138 aaKnown RBP4.48□□□□□ -1.69
RBM39-228ENST00000471635 B4GALNT1Q00973 533 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 GPS1Q13098 491 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 GALEQ14376 348 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 ZNF549Q6P9A3 640 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms