RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MAFFQ9ULX9 164 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 CAPN11Q9UMQ6 739 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ZMYM2Q9UBW7 1377 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 POM121BA6NF01 834 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 CLCA1A8K7I4 914 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 RHPN2P1A8MT19 583 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FOXN3O00409 490 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 RRHO14718 337 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 KPNA5O15131 536 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 INPPL1O15357 1258 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 THAP12O43422 761 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 TLR2O60603 784 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 PQBP1O60828 265 aaKnown RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 CNOT3O75175 753 aaKnown RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 IL18RAPO95256 599 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 MBPP02686 304 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 TMIGD3P0DMS9 266 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ARP10275 920 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 TSHRP16473 764 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 DRD1P21728 446 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ATICP31939 592 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 JAK3P52333 1124 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 POLGP54098 1239 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 WDR5P61964 334 aaKnown RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 RPS13P62277 151 aaKnown RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FHL1Q13642 323 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FHL3Q13643 280 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ACOX1Q15067 660 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 SLC9C1Q4G0N8 1177 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 AASDHQ4L235 1098 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 KLHDC7AQ5VTJ3 777 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ABLIM2Q6H8Q1 611 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 CRTC1Q6UUV9 634 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ZNF517Q6ZMY9 492 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 DEF8Q6ZN54 512 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 RNF44Q7L0R7 432 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 IRF2BP2Q7Z5L9 587 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 DGKHQ86XP1 1220 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ANKRD13BQ86YJ7 626 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 C16orf71Q8IYS4 520 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 SDR16C5Q8N3Y7 309 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 CCDC33Q8N5R6 958 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FAM71DQ8N9W8 422 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 SUN3Q8TAQ9 357 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 PHKBQ93100 1093 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 LRRC46Q96FV0 321 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 PRR11Q96HE9 360 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FAM227BQ96M60 508 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FCRL5Q96RD9 977 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 WDR24Q96S15 920 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 CINPQ9BW66 212 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 TM2D2Q9BX73 214 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 NUAK2Q9H093 628 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 NUP62CLQ9H1M0 184 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 FOXP1Q9H334 677 aaPredicted RBP1.71□□□□□ -2.14
UBXN4-207ENST00000471246 SAP30LQ9HAJ7 183 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 ARL8BQ9NVJ2 186 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 PCDHB2Q9Y5E7 798 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 CKAP5Q14008 2032 aa1.71□□□□□ -2.14
UBXN4-207ENST00000471246 TRIP12Q14669 1992 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SPATA31A1Q5TZJ5 1347 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SHROOM4Q9ULL8 1493 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 A0A1W2PPC4 97 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 MYMKA6NI61 221 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 C2CD4BA6NLJ0 364 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 C16orf96A6NNT2 1141 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 CBFA2T3O75081 653 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 TOMM40O96008 361 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 PLAUP00749 431 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 TMEM191BP0C7N4 346 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 CTSAP10619 480 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 MYL4P12829 197 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 FGFR2P21802 821 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SCP2P22307 547 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 NDUFS1P28331 727 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SLC5A2P31639 672 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 PBX1P40424 430 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 PIK3CBP42338 1070 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 CASP5P51878 434 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 DGKQP52824 942 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 FOXG1P55316 489 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 LINC00205P59089 165 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 HSF1Q00613 529 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 ZNF543Q08ER8 600 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 BFSP2Q13515 415 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 DNASE1L3Q13609 305 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 PFKFB3Q16875 520 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 FAXCQ5TGI0 409 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 MRNIPQ6NTE8 343 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 KRT28Q7Z3Y7 464 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 TFAP2DQ7Z6R9 452 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 FMNL3Q8IVF7 1028 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 CCDC28AQ8IWP9 274 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 ARFGAP1Q8N6T3 406 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 RNF152Q8N8N0 203 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 ZNF548Q8NEK5 533 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 WIPF2Q8TF74 440 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 EVPLQ92817 2033 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 TTC17Q96AE7 1141 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms