RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TMIGD3P0DMS9 266 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 PRF1P14222 555 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 TRIM27P14373 513 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 PTGER1P34995 402 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 C4orf46Q504U0 113 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 KRT73Q86Y46 540 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 FSTL5Q8N475 847 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 SMCR8Q8TEV9 937 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 CCDC136Q96JN2 1154 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 TRNAU1APQ9NX07 287 aaKnown RBP5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 FOXN3O00409 490 aaPredicted RBP5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 PMM2O15305 246 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 NDST3O95803 873 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 IDUAP35475 653 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 MMP13P45452 471 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 EPHA10Q5JZY3 1008 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 DENND2CQ68D51 928 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 IRF2BP2Q7Z5L9 587 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 CCDC28AQ8IWP9 274 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 NAF1Q96HR8 494 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 HS6ST2Q96MM7 605 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 COLEC11Q9BWP8 271 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 ZBTB26Q9HCK0 441 aa5.84□□□□□ -1.47
PRPF40A-206ENST00000471167 SPATA31A1Q5TZJ5 1347 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 OR2W5A6NFC9 320 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 TLR2O60603 784 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 CNOT3O75175 753 aaKnown RBP5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 PEX14O75381 377 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 CYP19A1P11511 503 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 STT3AP46977 705 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 KPNB1Q14974 876 aaKnown RBP5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 RBMS2Q15434 407 aaKnown RBP5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 AWAT2Q6E213 333 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 HIBCHQ6NVY1 386 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 NANOGP1Q8N7R0 232 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 FAM71DQ8N9W8 422 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 GLIS1Q8NBF1 620 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 HIC2Q96JB3 615 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 ZMYND8Q9ULU4 1186 aaPredicted RBP5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 PCDHB2Q9Y5E7 798 aa5.83□□□□□ -1.48
PRPF40A-206ENST00000471167 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 PRYO14603 147 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 NTN1O95631 604 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 FGF2P09038 288 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 CTSAP10619 480 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 LINC00205P59089 165 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 TXNL4AP83876 142 aaKnown RBP5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 GHRHRQ02643 423 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 ZNF91Q05481 1191 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 SRSF1Q07955 248 aaKnown RBP eCLIP5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 CCDC15Q0P6D6 951 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 SAFBQ15424 915 aaKnown RBP eCLIP5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 TMEM196Q5HYL7 178 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 SHC4Q6S5L8 630 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 VSTM1Q6UX27 236 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 DEF8Q6ZN54 512 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 TECPR1Q7Z6L1 1165 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 PRSS3P2Q8NHM4 247 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 PIGOQ8TEQ8 1089 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 P2RY11Q96G91 374 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 VPS50Q96JG6 964 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 PCDHAC1Q9H158 963 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 ABHD10Q9NUJ1 306 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 FNIP2Q9P278 1114 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 VPS4AQ9UN37 437 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 MAN2B2Q9Y2E5 1009 aa5.82□□□□□ -1.48
PRPF40A-206ENST00000471167 TTC3P53804 2025 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 APOL1O14791 398 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 FGBP02675 491 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 HARSP12081 509 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 PECAM1P16284 738 aaPredicted RBP5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 SLC5A2P31639 672 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 TM4SF4P48230 202 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 WDR5P61964 334 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 GPS1Q13098 491 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 PMS2P11Q13670 270 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 EARS2Q5JPH6 523 aaKnown RBP5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 FAXCQ5TGI0 409 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 PIK3AP1Q6ZUJ8 805 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 CCDC33Q8N5R6 958 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 PJA1Q8NG27 643 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 VCPIP1Q96JH7 1222 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 HEY2Q9UBP5 337 aa5.81□□□□□ -1.48
PRPF40A-206ENST00000471167 HMGB1P1B2RPK0 211 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 MYL3P08590 195 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 PTMSP20962 102 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 HOXA7P31268 230 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 ATP1A4Q13733 1029 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 RALBP1Q15311 655 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 SLC35G1Q2M3R5 365 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 ARHGAP15Q53QZ3 475 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 TMEM63BQ5T3F8 832 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 KYAT3Q6YP21 454 aaKnown RBP5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 UBE2Q1Q7Z7E8 422 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 FSCN3Q9NQT6 498 aa5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.8□□□□□ -1.48
PRPF40A-206ENST00000471167 CCDC187A0A096LP49 1063 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 C2CD4BA6NLJ0 364 aa5.79□□□□□ -1.48
PRPF40A-206ENST00000471167 KCNAB3O43448 404 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms