RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 C22orf31O95567 290 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 PTK6Q13882 451 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 LGSNQ5TDP6 509 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 AGAP11Q8TF27 550 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 RSPH9Q9H1X1 276 aaPredicted RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 C12orf4Q9NQ89 552 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 ANGPTL3Q9Y5C1 460 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 GRIN3BO60391 1043 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 PIAS1O75925 651 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 RECQL4O94761 1208 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 HOXD12P35452 270 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 VCPP55072 806 aaKnown RBP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 LRP8Q14114 963 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 ZNF449Q6P9G9 518 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 C3orf62Q6ZUJ4 267 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 PPM1NQ8N819 430 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 PPTC7Q8NI37 304 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 ART4Q93070 314 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 ROPN1BQ9BZX4 212 aaPredicted RBP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 FZD8Q9H461 694 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 ROPN1Q9HAT0 212 aaPredicted RBP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 DDX28Q9NUL7 540 aaKnown RBP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 TMED5Q9Y3A6 229 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 SMNDC1O75940 238 aaKnown RBP eCLIP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 PAEPP09466 180 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 KRT20P35900 424 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 FAM182AQ5T1J6 154 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 HEATR4Q86WZ0 1026 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 LRRN4Q8WUT4 740 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 PITPNM3Q9BZ71 974 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 ECT2Q9H8V3 914 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 NINJ2Q9NZG7 142 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 HMGXB4Q9UGU5 601 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 LNPEPQ9UIQ6 1025 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 STYXL1Q9Y6J8 313 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 YBX3P16989 372 aaKnown RBP eCLIP17.09■□□□□ 0.33
HOXB3-205ENST00000470495 FAM117BQ6P1L5 589 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 LRRC34Q8IZ02 419 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 GALNT6Q8NCL4 622 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 STKLD1Q8NE28 680 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 SEPT8Q92599 483 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 TNIP3Q96KP6 325 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 TRABDQ9H4I3 376 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
HOXB3-205ENST00000470495 MAN1A2O60476 641 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 EDNRBP24530 442 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 ACAT1P24752 427 aaKnown RBP17.08■□□□□ 0.33
HOXB3-205ENST00000470495 ARHGAP1Q07960 439 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 STILQ15468 1287 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 DCAF6Q58WW2 860 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 MAP3K21Q5TCX8 1036 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 SHCBP1Q8NEM2 672 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 CNPY3Q9BT09 278 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 FAM129AQ9BZQ8 928 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 PIDD1Q9HB75 910 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 PRM3Q9NNZ6 103 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 FGFR1OP2Q9NVK5 253 aa17.08■□□□□ 0.33
HOXB3-205ENST00000470495 SIGLEC16A6NMB1 481 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 CIB2O75838 187 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 LMNAP02545 664 aaKnown RBP17.08■□□□□ 0.32
HOXB3-205ENST00000470495 PAN2Q504Q3 1202 aaKnown RBP17.08■□□□□ 0.32
HOXB3-205ENST00000470495 NLRP9Q7RTR0 991 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 APLFQ8IW19 511 aaPredicted RBP17.08■□□□□ 0.32
HOXB3-205ENST00000470495 DTX3LQ8TDB6 740 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 ELOVL4Q9GZR5 314 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 FOXO6A8MYZ6 492 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 NVLO15381 856 aaKnown RBP17.08■□□□□ 0.32
HOXB3-205ENST00000470495 DCTN3O75935 186 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 GSTA2P09210 222 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 SMPD1P17405 629 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 IRX4P78413 519 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 C18orf25Q96B23 403 aaPredicted RBP17.08■□□□□ 0.32
HOXB3-205ENST00000470495 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
HOXB3-205ENST00000470495 CD4P01730 458 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 ERBB2P04626 1255 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 MMRN1Q13201 1228 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 ZNF268Q14587 947 aaPredicted RBP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 MFSD10Q14728 455 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 TXNRD3NBQ6F5E7 133 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 TMEM214Q6NUQ4 689 aaKnown RBP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 ZDHHC24Q6UX98 284 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 PCDH18Q9HCL0 1135 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 KCNH4Q9UQ05 1017 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 TIMM13Q9Y5L4 95 aaPredicted RBP17.07■□□□□ 0.32
HOXB3-205ENST00000470495 C17orf102A2RUQ5 167 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 LIASO43766 372 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 LRPAP1P30533 357 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 TAF6P49848 677 aa17.07■□□□□ 0.32
HOXB3-205ENST00000470495 CDC42EP1Q00587 391 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms