RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TMEM110-MUSTN1A8MSY1 372 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 ZNF197O14709 1029 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 IRAK2O43187 625 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MSI1O43347 362 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 FGF19O95750 216 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 IGLV3-27P01718 113 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 CEBPBP17676 345 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 IL1R2P27930 398 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MIPP30301 263 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 PCK1P35558 622 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 ATP5C1P36542 298 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 CXCR3P49682 368 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 SLC25A11Q02978 314 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 ITIH3Q06033 890 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 EFEMP1Q12805 493 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 CCDC85BQ15834 202 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 IFI16Q16666 785 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 CDO1Q16878 200 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 ZNF569Q5MCW4 686 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 C2orf16Q68DN1 1984 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 SLC35F6Q8N357 371 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 ARL14EPQ8N8R7 260 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MAB21L3Q8N8X9 362 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 SMRP1Q8NCR6 262 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 ADAMTS19Q8TE59 1207 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 RNF139Q8WU17 664 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 FAM172AQ8WUF8 416 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 SUSD6Q92537 303 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 WBP2Q969T9 261 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 WDR24Q96S15 920 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 PEBP4Q96S96 227 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 TASP1Q9H6P5 420 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 OLA1Q9NTK5 396 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MARCH2Q9P0N8 246 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MRPS23Q9Y3D9 190 aaKnown RBP11.73□□□□□ -0.53
SREBF1-209ENST00000470247 MYO16Q9Y6X6 1858 aa11.73□□□□□ -0.53
SREBF1-209ENST00000470247 OBSL1O75147 1896 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 KCNU1A8MYU2 1149 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 GREM1O60565 184 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 FTCDO95954 541 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 FOSL2P15408 326 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 PFKLP17858 780 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 HDCP19113 662 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 DDX6P26196 483 aaKnown RBP eCLIP11.72□□□□□ -0.537e-7■□□□□ 9.2
SREBF1-209ENST00000470247 SLC1A1P43005 524 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 SLC7A9P82251 487 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 NNTQ13423 1086 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 CBX2Q14781 532 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-209ENST00000470247 TRIP4Q15650 581 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-209ENST00000470247 ATP13A4Q4VNC1 1196 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
SREBF1-209ENST00000470247 ATAT1Q5SQI0 421 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 ARTNQ5T4W7 220 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 GPR158Q5T848 1215 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
SREBF1-209ENST00000470247 DAAM2Q86T65 1068 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 TRIM58Q8NG06 486 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 FCRL2Q96LA5 508 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-209ENST00000470247 CDK5RAP1Q96SZ6 601 aaKnown RBP11.72□□□□□ -0.53
SREBF1-209ENST00000470247 MAGEB5Q9BZ81 275 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 GKN1Q9NS71 199 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 DDIT4Q9NX09 232 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 LCMT1Q9UIC8 334 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 USTQ9Y2C2 406 aa11.72□□□□□ -0.53
SREBF1-209ENST00000470247 CLUHO75153 1309 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 SLC12A8A0AV02 714 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 H3BQ06 376 aaPredicted RBP11.71□□□□□ -0.53
SREBF1-209ENST00000470247 DDX3YO15523 660 aaKnown RBP11.71□□□□□ -0.53
SREBF1-209ENST00000470247 KIF5CO60282 957 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 RNF8O76064 485 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 F9P00740 461 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 KLKB1P03952 638 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 FSHRP23945 695 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 WEE1P30291 646 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 RDXP35241 583 aaKnown RBP11.71□□□□□ -0.53
SREBF1-209ENST00000470247 MARCKSL1P49006 195 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 PEX5P50542 639 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 KCNQ1P51787 676 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.53
SREBF1-209ENST00000470247 DEUP1Q05D60 604 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 NME3Q13232 169 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 CLUL1Q15846 466 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 EP400NLQ6ZTU2 488 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 TADA2BQ86TJ2 420 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 FAM131BQ86XD5 332 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 MIB1Q86YT6 1006 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 CMTM8Q8IZV2 173 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 SYCE1Q8N0S2 351 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 CCDC185Q8N715 623 aa11.71□□□□□ -0.53
SREBF1-209ENST00000470247 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms