RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 FUKQ8N0W3 1084 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 VPS52Q8N1B4 723 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 LINC01465Q8N7H1 131 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 NAT8LQ8N9F0 302 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 FAM71DQ8N9W8 422 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 FBXO36Q8NEA4 188 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 OR6B3Q8NGW1 331 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 UBA3Q8TBC4 463 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ZNF398Q8TD17 642 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 MAML1Q92585 1016 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 KLHL29Q96CT2 875 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 PWWP2AQ96N64 755 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 PPP1R16BQ96T49 567 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 PAFAH2Q99487 392 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 PARK7Q99497 189 aaKnown RBP8.31□□□□□ -1.08
SMC4-212ENST00000470240 ZNF670Q9BS34 389 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 TUBB6Q9BUF5 446 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 SDCBP2Q9H190 292 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ABHD16BQ9H3Z7 469 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ECT2Q9H8V3 914 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 SPON1Q9HCB6 807 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 MLXIPLQ9NP71 852 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 PDGFCQ9NRA1 345 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 EURLQ9NYK6 297 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 PHTF1Q9UMS5 762 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 UBQLN1Q9UMX0 589 aaKnown RBP8.31□□□□□ -1.08
SMC4-212ENST00000470240 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
SMC4-212ENST00000470240 EP400Q96L91 3159 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 A8MXQ7 604 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 E5RJQ4 531 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 PDHXO00330 501 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 DNM1LO00429 736 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 KCNN4O15554 427 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 SPAG7O75391 227 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 MMP3P08254 477 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 KRT4P19013 534 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 TAC1P20366 129 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 IL1R2P27930 398 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 ARL4AP40617 200 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 NR2C2P49116 596 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 ZNF200P98182 395 aaPredicted RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 ADCY1Q08828 1119 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 BST2Q10589 180 aaKnown RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 PTK7Q13308 1070 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 ORC1Q13415 861 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 PKN2Q16513 984 aaKnown RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 CDO1Q16878 200 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 DUSP28Q4G0W2 176 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 TAPT1Q6NXT6 567 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 LVRNQ6Q4G3 990 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 PRUNE1Q86TP1 453 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 PNMA8AQ86V59 439 aaPredicted RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 ZC3H18Q86VM9 953 aaKnown RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 UNC45BQ8IWX7 931 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 GLIS1Q8NBF1 620 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 FAM172AQ8WUF8 416 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 MTBPQ96DY7 904 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 TNIP3Q96KP6 325 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 SNX27Q96L92 541 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 RNF157Q96PX1 679 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 TWNKQ96RR1 684 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 GBA2Q9HCG7 927 aaPredicted RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 ABCF3Q9NUQ8 709 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 CUEDC1Q9NWM3 386 aaPredicted RBP8.3□□□□□ -1.08
SMC4-212ENST00000470240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.3□□□□□ -1.082e-7■■■■□ 26.2
SMC4-212ENST00000470240 CYTH4Q9UIA0 394 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 SNX9Q9Y5X1 595 aa8.3□□□□□ -1.08
SMC4-212ENST00000470240 NRCAMQ92823 1304 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 CCL15-CCL14A0A0B4J2E2 113 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 BCLAF3A2AJT9 711 aaKnown RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 I3L4J1 428 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 TRDMT1O14717 391 aaKnown RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 LPXNO60711 386 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 EDF1O60869 148 aaKnown RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 KRT38O76015 456 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 UBOX5O94941 541 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 ASMTLO95671 621 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 GNAT1P11488 350 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 NQO1P15559 274 aaKnown RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 ADCYAP1R1P41586 468 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 PTPN9P43378 593 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 RGS7P49802 495 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 SERPINB9P50453 376 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 BNIP1Q12981 228 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 RIPK1Q13546 671 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 FASTKD3Q14CZ7 662 aaKnown RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 CCL15Q16663 113 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 EFHC1Q5JVL4 640 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 SPDYAQ5MJ70 313 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 FBXO47Q5MNV8 452 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 HP1BP3Q5SSJ5 553 aaPredicted RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 TTC39BQ5VTQ0 682 aaPredicted RBP8.29□□□□□ -1.08
SMC4-212ENST00000470240 C9orf131Q5VYM1 1079 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 OLFML1Q6UWY5 402 aa8.29□□□□□ -1.08
SMC4-212ENST00000470240 MAMDC4Q6UXC1 1216 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms