RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 C12orf40Q86WS4 652 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 RALGPS2Q86X27 583 aaPredicted RBP18.64■□□□□ 0.57
LMNA-211ENST00000470199 DNAAF5Q86Y56 855 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 DENND1CQ8IV53 801 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 IPO4Q8TEX9 1081 aaKnown RBP18.64■□□□□ 0.57
LMNA-211ENST00000470199 GOLGA1Q92805 767 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 C18orf8Q96DM3 657 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 SLC2A13Q96QE2 648 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 ADAM33Q9BZ11 813 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 HAUS4Q9H6D7 363 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 POPDC2Q9HBU9 364 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 RBM12Q9NTZ6 932 aaKnown RBP18.64■□□□□ 0.57
LMNA-211ENST00000470199 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.57
LMNA-211ENST00000470199 AIPL1Q9NZN9 384 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 DLGAP2Q9P1A6 1054 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 TBC1D14Q9P2M4 693 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 AGO1Q9UL18 857 aaKnown RBP18.64■□□□□ 0.57
LMNA-211ENST00000470199 SIT1Q9Y3P8 196 aa18.64■□□□□ 0.57
LMNA-211ENST00000470199 A0A1W2PQJ5 194 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 ANTXRLA6NF34 631 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 GOLGA8SH3BPF8 625 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 MAN2B1O00754 1011 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 SLC9A3R1O14745 358 aaPredicted RBP18.63■□□□□ 0.57
LMNA-211ENST00000470199 GJB6O95452 261 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 SLC6A11P48066 632 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 GALK1P51570 392 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 MLLT6P55198 1093 aaPredicted RBP18.63■□□□□ 0.57
LMNA-211ENST00000470199 RNASE9P60153 205 aaKnown RBP18.63■□□□□ 0.57
LMNA-211ENST00000470199 GOLGA8FQ08AF8 430 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 GOLGA8DPQ0D2H9 430 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 DCAF6Q58WW2 860 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 EFHC1Q5JVL4 640 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 ZNF571Q7Z3V5 609 aaPredicted RBP18.63■□□□□ 0.57
LMNA-211ENST00000470199 KIAA1958Q8N8K9 716 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 C11orf70Q9BRQ4 267 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 NUP58Q9BVL2 599 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 TAS2R14Q9NYV8 317 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 LSM7Q9UK45 103 aaKnown RBP18.63■□□□□ 0.57
LMNA-211ENST00000470199 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
LMNA-211ENST00000470199 HBS1LQ9Y450 684 aaKnown RBP18.63■□□□□ 0.57
LMNA-211ENST00000470199 TRDMT1O14717 391 aaKnown RBP18.62■□□□□ 0.57
LMNA-211ENST00000470199 CAPN9O14815 690 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 CBFA2T2O43439 604 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 IGLV3-27P01718 113 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 TFE3P19532 575 aaPredicted RBP18.62■□□□□ 0.57
LMNA-211ENST00000470199 MMP8P22894 467 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 CASP14P31944 242 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 OPRD1P41143 372 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 FSTL4Q6MZW2 842 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 TRNP1Q6NT89 227 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 TRIM72Q6ZMU5 477 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 TPGS1Q6ZTW0 290 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 BEND5Q7L4P6 421 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 SLC26A9Q7LBE3 791 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 SFTPA1Q8IWL2 248 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 NAT16Q8N8M0 369 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
LMNA-211ENST00000470199 PLD4Q96BZ4 506 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 FCRL2Q96LA5 508 aaPredicted RBP18.62■□□□□ 0.57
LMNA-211ENST00000470199 SPHK2Q9NRA0 654 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 ASNSD1Q9NWL6 643 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 CALCOCO1Q9P1Z2 691 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 ITIH6Q6UXX5 1313 aa18.62■□□□□ 0.57
LMNA-211ENST00000470199 KMT2EQ8IZD2 1858 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 GOLGA6L7A0A1B0GV03 622 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 HSF2BPO75031 334 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 IGLV3-25P01717 112 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 GLI1P08151 1106 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 CHRNB1P11230 501 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 ADH5P11766 374 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 TNFAIP3P21580 790 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 PRKCIP41743 596 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 TBX4P57082 545 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 CENPCQ03188 943 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 FAM102AQ5T9C2 384 aaPredicted RBP18.61■□□□□ 0.57
LMNA-211ENST00000470199 OTUD1Q5VV17 481 aaPredicted RBP18.61■□□□□ 0.57
LMNA-211ENST00000470199 HGSNATQ68CP4 663 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 TOGARAM2Q6ZUX3 1019 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 VSTM4Q8IW00 320 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 ZNF397Q8NF99 534 aaPredicted RBP18.61■□□□□ 0.57
LMNA-211ENST00000470199 BHMTQ93088 406 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 OTUB2Q96DC9 234 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 LMAN1LQ9HAT1 526 aa18.61■□□□□ 0.57
LMNA-211ENST00000470199 SYNJ2BP-COX16A0A087WUM0 186 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 TMCO5BA8MYB1 307 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 DDX3XO00571 662 aaKnown RBP eCLIP18.6■□□□□ 0.579e-21■■■□□ 16.5
LMNA-211ENST00000470199 TRIM24O15164 1050 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 DAB1O75553 588 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 TRUB2O95900 331 aaKnown RBP18.6■□□□□ 0.57
LMNA-211ENST00000470199 EGFP01133 1207 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 PLEKP08567 350 aaPredicted RBP18.6■□□□□ 0.57
LMNA-211ENST00000470199 CCDC172P0C7W6 258 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 SNX16P57768 344 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 ZBED6P86452 979 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 KLHL30Q0D2K2 578 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 NR1H3Q13133 447 aa18.6■□□□□ 0.57
LMNA-211ENST00000470199 EIF4EBP2Q13542 120 aaPredicted RBP18.6■□□□□ 0.57
LMNA-211ENST00000470199 ANO4Q32M45 955 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms