RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ARMC2Q8NEN0 867 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 FAM136AQ96C01 138 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 ACAP3Q96P50 834 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 QKIQ96PU8 341 aaKnown RBP eCLIP14.14□□□□□ -0.15
BRCA1-209ENST00000470026 MECRQ9BV79 373 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 XAB2Q9HCS7 855 aaKnown RBP14.14□□□□□ -0.15
BRCA1-209ENST00000470026 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 HESX1Q9UBX0 185 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 NME7Q9Y5B8 376 aa14.14□□□□□ -0.15
BRCA1-209ENST00000470026 RALGAPA2Q2PPJ7 1873 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 COL1A2P08123 1366 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 CSDE1O75534 798 aaKnown RBP14.13□□□□□ -0.15
BRCA1-209ENST00000470026 ECM2O94769 699 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-209ENST00000470026 ALDH1A2O94788 518 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 PSMG1O95456 288 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 CDC25CP30307 473 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 RPL34P49207 117 aaKnown RBP14.13□□□□□ -0.15
BRCA1-209ENST00000470026 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 SLC10A2Q12908 348 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-209ENST00000470026 TTLL4Q14679 1199 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 TSNAXIP1Q2TAA8 658 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 FAM182AQ5T1J6 154 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 TRMT10BQ6PF06 316 aaKnown RBP14.13□□□□□ -0.15
BRCA1-209ENST00000470026 DPH6Q7L8W6 267 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 TREML1Q86YW5 311 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 TMPRSS6Q8IU80 811 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 WDR60Q8WVS4 1066 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 NMRK1Q9NWW6 199 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 MTMR10Q9NXD2 777 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 ZFATQ9P243 1243 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 STX18Q9P2W9 335 aaKnown RBP14.13□□□□□ -0.15
BRCA1-209ENST00000470026 PLA2G4CQ9UP65 541 aa14.13□□□□□ -0.15
BRCA1-209ENST00000470026 F8W8V4 182 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 TSPAN1O60635 241 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 GSRP00390 522 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 GRM5P41594 1212 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 BAG6P46379 1132 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 BMPR2Q13873 1038 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 CHI3L2Q15782 390 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 Q3C1V9 767 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 ARHGAP17Q68EM7 881 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 CAPRIN2Q6IMN6 1127 aaKnown RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 DEFB132Q7Z7B7 95 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 ARHGAP24Q8N264 748 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MPP5Q8N3R9 675 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 NRG4Q8WWG1 115 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MCUR1Q96AQ8 359 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MMP19Q99542 508 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 WWP1Q9H0M0 922 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 PDGFCQ9NRA1 345 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 DERAQ9Y315 318 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 CSADQ9Y600 493 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 CYB561D2O14569 222 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 CXCL11O14625 94 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 NVLO15381 856 aaKnown RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 KRT36O76013 467 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 LGALS2P05162 132 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MLNP12872 115 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 SNX16P57768 344 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MRPS35P82673 323 aaKnown RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 GBE1Q04446 702 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 SLC34A1Q06495 639 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 WASHC5Q12768 1159 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 RCN1Q15293 331 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 TBCCQ15814 346 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MARK2Q7KZI7 788 aaKnown RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 SLC26A9Q7LBE3 791 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 NUDCD3Q8IVD9 361 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 LMNTD2Q8IXW0 634 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 ADGRF2Q8IZF7 708 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 STKLD1Q8NE28 680 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 MRPL45Q9BRJ2 306 aaKnown RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 SIKE1Q9BRV8 207 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 CCDC106Q9BWC9 280 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 OSBPL1AQ9BXW6 950 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 C20orf27Q9GZN8 174 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 ARMCX1Q9P291 453 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 HBS1LQ9Y450 684 aaKnown RBP14.12□□□□□ -0.15
BRCA1-209ENST00000470026 USP3Q9Y6I4 520 aa14.12□□□□□ -0.15
BRCA1-209ENST00000470026 SCN1AP35498 2009 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 TBX10O75333 385 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 DGKIO75912 1065 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 DESP17661 470 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 TFE3P19532 575 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 KCTD2Q14681 263 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 NBPF20Q3BBV1 942 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 SNX30Q5VWJ9 437 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 KYAT3Q6YP21 454 aaKnown RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 UNC93AQ86WB7 457 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 ARID3BQ8IVW6 561 aaPredicted RBP14.11□□□□□ -0.15
BRCA1-209ENST00000470026 SCUBE3Q8IX30 993 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 OLFM3Q96PB7 478 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 FAM167BQ9BTA0 163 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 SLC13A1Q9BZW2 595 aa14.11□□□□□ -0.15
BRCA1-209ENST00000470026 PLEKHA5Q9HAU0 1116 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms