RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 PGGT1BP53609 377 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 FASTKD1Q53R41 847 aaKnown RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 ANGEL2Q5VTE6 544 aaKnown RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 AEBP2Q6ZN18 517 aaPredicted RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 FNIP1Q8TF40 1166 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 FAM172AQ8WUF8 416 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 IFT43Q96FT9 208 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 SIRPGQ9P1W8 387 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 WDR27A2RRH5 827 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 CHADO15335 359 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 ADCY6O43306 1168 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 MED7O43513 233 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 RNASEH1O60930 286 aaKnown RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 SARNPP82979 210 aaKnown RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 STX3Q13277 289 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 AMHR2Q16671 573 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 MPZL3Q6UWV2 235 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 DEPDC1BQ8WUY9 529 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 PPP1R36Q96LQ0 422 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 SNRNP25Q9BV90 132 aaKnown RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 VCXQ9H320 206 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 BTBD7Q9P203 1132 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 RPL26L1Q9UNX3 145 aaKnown RBP12.51□□□□□ -0.41
VARS2-205ENST00000469358 IGKV6D-21A0A0A0MT36 114 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 SOWAHBA6NEL2 793 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 CILPO75339 1184 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 TM7SF2O76062 418 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 BPGMP07738 259 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 SESN2P58004 480 aaPredicted RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 TREML2Q5T2D2 321 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 PMF1Q6P1K2 205 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 ZBTB8OSQ8IWT0 167 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 SIGLEC10Q96LC7 697 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 CNPY3Q9BT09 278 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 TUBB6Q9BUF5 446 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 XAB2Q9HCS7 855 aaKnown RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 MAN1C1Q9NR34 630 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 A0A088AWK7 358 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 APOL1O14791 398 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 GSRP00390 522 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 LYNP07948 512 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 CDC16Q13042 620 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 TCHHL1Q5QJ38 904 aaPredicted RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 GJC2Q5T442 439 aaPredicted RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 MAVSQ7Z434 540 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 PYROXD2Q8N2H3 581 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 C7orf26Q96N11 449 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 NDE1Q9NXR1 346 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 PAK5Q9P286 719 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 MGAMO43451 1857 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 CIB2O75838 187 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 ACTR3P61158 418 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 CMPK2Q5EBM0 449 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 NCAPG2Q86XI2 1143 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 SLC26A7Q8TE54 656 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 BCO2Q9BYV7 579 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 KLC2Q9H0B6 622 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 ZNF212Q9UDV6 495 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 EMCNQ9ULC0 261 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
VARS2-205ENST00000469358 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
VARS2-205ENST00000469358 AHCYL1O43865 530 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 GABBR2O75899 941 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 ENDOD1O94919 500 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PFKMP08237 780 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PRKCHP24723 683 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 EFNA5P52803 228 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 AP3M2P53677 418 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 CFAP157Q5JU67 520 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 NDRG1Q92597 394 aaKnown RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 FGD4Q96M96 766 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 DHX35Q9H5Z1 703 aaKnown RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 PTPRHQ9HD43 1115 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 G3BP2Q9UN86 482 aaKnown RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 ADAMTS5Q9UNA0 930 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 NDC80O14777 642 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 PROCP04070 461 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 MSX2P35548 267 aaPredicted RBP12.49□□□□□ -0.41
VARS2-205ENST00000469358 CPOXP36551 454 aa12.49□□□□□ -0.41
VARS2-205ENST00000469358 TFDP2Q14188 446 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms