RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CECR2Q9BXF3 1484 aa5.87□□□□□ -1.47
LSM5-209ENST00000468872 ARHGEF17Q96PE2 2063 aaPredicted RBP5.86□□□□□ -1.47
LSM5-209ENST00000468872 PNMA6EA0A0J9YXQ4 647 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 WDR27A2RRH5 827 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 LINC00473A8K010 186 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 FAM155BO75949 473 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 FESP07332 822 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 IL6RP08887 468 aaPredicted RBP5.86□□□□□ -1.47
LSM5-209ENST00000468872 CST5P28325 142 aaPredicted RBP5.86□□□□□ -1.47
LSM5-209ENST00000468872 AKT1P31749 480 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 MAPK9P45984 424 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 MTAPQ13126 283 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 ACOX1Q15067 660 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 BTBD16Q32M84 506 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 ALFQ53S48 1182 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 RINT1Q6NUQ1 792 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 NRSN1Q8IZ57 195 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 RUBCNQ92622 972 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 RSC1A1Q92681 617 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 UBXN10Q96LJ8 280 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 KLC4Q9NSK0 619 aa5.86□□□□□ -1.47
LSM5-209ENST00000468872 FAM90A18PA6NE21 464 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 FAM90A16PA6NEW6 464 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 HMX3A6NHT5 357 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 FAM90A9PA6NNJ1 464 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 FAM90A5PA8MXJ8 464 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 B9A039 149 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 EIF3FO00303 357 aaPredicted RBP5.85□□□□□ -1.47
LSM5-209ENST00000468872 WDR47O94967 919 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 FAM90A15PP0C7V4 464 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 FAM90A14PP0C7W9 464 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 ITPKBP27987 946 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 ADD2P35612 726 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 PBX1P40424 430 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 PRKAA2P54646 552 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 SOX10P56693 466 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 TRIM60Q495X7 471 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 ZNF618Q5T7W0 954 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 TEDDM1Q5T9Z0 273 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 LVRNQ6Q4G3 990 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 DPY19L3Q6ZPD9 716 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 SPPL3Q8TCT6 385 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 RSPRY1Q96DX4 576 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 WDYHV1Q96HA8 205 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 SAYSD1Q9NPB0 183 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 TRIM36Q9NQ86 728 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 KIF17Q9P2E2 1029 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 STEAP1Q9UHE8 339 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 DAPP1Q9UN19 280 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 ST3GAL5Q9UNP4 418 aa5.85□□□□□ -1.47
LSM5-209ENST00000468872 NCAM2O15394 837 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 RPP40O75818 363 aaKnown RBP5.84□□□□□ -1.47
LSM5-209ENST00000468872 PCSK6P29122 969 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 CUL4BQ13620 913 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 CYP1B1Q16678 543 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 TMEM196Q5HYL7 178 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 ATPAF1Q5TC12 328 aaPredicted RBP5.84□□□□□ -1.47
LSM5-209ENST00000468872 MSANTD2Q6P1R3 559 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 AMIGO2Q86SJ2 522 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
LSM5-209ENST00000468872 RFKQ969G6 155 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 ZSCAN31Q96LW9 406 aaPredicted RBP5.84□□□□□ -1.47
LSM5-209ENST00000468872 ALG8Q9BVK2 526 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 EHD3Q9NZN3 535 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 PGAP2Q9UHJ9 254 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 FEM1BQ9UK73 627 aa5.84□□□□□ -1.47
LSM5-209ENST00000468872 LRRFIP2Q9Y608 721 aaKnown RBP5.84□□□□□ -1.47
LSM5-209ENST00000468872 WIPF3A6NGB9 483 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 CGB1A6NKQ9 187 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 H0Y3Z8 333 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 SPRY2O43597 315 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 SH3BP5O60239 455 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 PPP6R2O75170 966 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 CER1O95813 267 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 CD19P15391 556 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 EIF4A1P60842 406 aaKnown RBP5.83□□□□□ -1.48
LSM5-209ENST00000468872 CSHL1Q14406 222 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 FBXO47Q5MNV8 452 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 TTC22Q5TAA0 569 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 GRHL2Q6ISB3 625 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 NFRKBQ6P4R8 1299 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 PIK3AP1Q6ZUJ8 805 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 RRAGAQ7L523 313 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 RAB11FIP2Q7L804 512 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 HERC6Q8IVU3 1022 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 WDR60Q8WVS4 1066 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 XAGE5Q8WWM1 108 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 THAP4Q8WY91 577 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 CTHRC1Q96CG8 243 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 MCRS1Q96EZ8 462 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 PBKQ96KB5 322 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 TRAPPC9Q96Q05 1148 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 VPS16Q9H269 839 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 NKX1-2Q9UD57 310 aaPredicted RBP5.83□□□□□ -1.48
LSM5-209ENST00000468872 ADAM21Q9UKJ8 722 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 GABRQQ9UN88 632 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 CNTN6Q9UQ52 1028 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 SH2B3Q9UQQ2 575 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 WNT6Q9Y6F9 365 aa5.83□□□□□ -1.48
LSM5-209ENST00000468872 GCOM1H8Y6P7 765 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms