RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RPL21P46778 160 aaKnown RBP19.72■□□□□ 0.75
SMC4-209ENST00000468653 TRIP13Q15645 432 aaPredicted RBP19.72■□□□□ 0.75
SMC4-209ENST00000468653 EFHC2Q5JST6 749 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 SLC8B1Q6J4K2 584 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 C16orf59Q7L2K0 433 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 SLC35B2Q8TB61 432 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 P3H4Q92791 437 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 MAGEB5Q9BZ81 275 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 SCML2Q9UQR0 700 aa19.72■□□□□ 0.75
SMC4-209ENST00000468653 MAP2K7O14733 419 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 RPL17P18621 184 aaKnown RBP19.71■□□□□ 0.75
SMC4-209ENST00000468653 OR1D2P34982 312 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 AIF1P55008 147 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 RPL10AP62906 217 aaKnown RBP19.71■□□□□ 0.75
SMC4-209ENST00000468653 DUSP4Q13115 394 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 ARL13BQ3SXY8 428 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 SCD5Q86SK9 330 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 PCDH19Q8TAB3 1148 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 GPR152Q8TDT2 470 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 FAF2Q96CS3 445 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 NEUROG2Q9H2A3 272 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 WDR6Q9NNW5 1121 aaKnown RBP19.71■□□□□ 0.75
SMC4-209ENST00000468653 MTMR10Q9NXD2 777 aa19.71■□□□□ 0.75
SMC4-209ENST00000468653 MCF2LO15068 1137 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ADAM12O43184 909 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 RTN3O95197 1032 aaPredicted RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 VNN2O95498 520 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 KRT14P02533 472 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ITGAVP06756 1048 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 PECAM1P16284 738 aaPredicted RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 ADRA1BP35368 520 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 GLUD2P49448 558 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 PLTPP55058 493 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 EIF3EP60228 445 aaKnown RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 ROR1Q01973 937 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 OASLQ15646 514 aaKnown RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 C1orf228Q6PIY5 440 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 DENND5BQ6ZUT9 1274 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 TAC4Q86UU9 113 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 MON1AQ86VX9 555 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 PYROXD2Q8N2H3 581 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ARHGAP18Q8N392 663 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 PQLC3Q8N755 202 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 CCDC89Q8N998 374 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 DQX1Q8TE96 717 aaKnown RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 RNF139Q8WU17 664 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 RNF34Q969K3 372 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 HERC2P3Q9BVR0 1158 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 TMPRSS4Q9NRS4 437 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 FBXW11Q9UKB1 542 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 A0A1W2PQH9 124 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 WDR27A2RRH5 827 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 SGK1O00141 431 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ATF2P15336 505 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ZFXP17010 805 aaPredicted RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 TGM2P21980 687 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 YWHAQP27348 245 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ADCY8P40145 1251 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 CALCOCO2Q13137 446 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 SLC9A4Q6AI14 798 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 NPNTQ6UXI9 565 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ALLCQ8N6M5 410 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 PLD5Q8N7P1 536 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 NTAN1Q96AB6 310 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 SPATA17Q96L03 361 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 CSPG4P5Q96PW8 444 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 TMEM121Q9BTD3 319 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 ZBED2Q9BTP6 218 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 CRISPLD1Q9H336 500 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 WDCPQ9H6R7 721 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 NMUR1Q9HB89 426 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 AAASQ9NRG9 546 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 GRHL1Q9NZI5 618 aa19.7■□□□□ 0.74
SMC4-209ENST00000468653 CWC15Q9P013 229 aaKnown RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 RCOR3Q9P2K3 495 aaPredicted RBP19.7■□□□□ 0.74
SMC4-209ENST00000468653 H3BRJ5 948 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 PPM1AP35813 382 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 CXCR3P49682 368 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 VPS41P49754 854 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 USP46P62068 366 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 DSG1Q02413 1049 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 DDX53Q86TM3 631 aaKnown RBP19.69■□□□□ 0.74
SMC4-209ENST00000468653 C7orf61Q8IZ16 206 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 CCHCR1Q8TD31 782 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 SNF8Q96H20 258 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 FMO2Q99518 471 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 IL37Q9NZH6 218 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 NEU2Q9Y3R4 380 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 PCDHB12Q9Y5F1 795 aa19.69■□□□□ 0.74
SMC4-209ENST00000468653 URODP06132 367 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 GOT1P17174 413 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 PGFP49763 221 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 NOMO1Q15155 1222 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 FBXO32Q969P5 355 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 CLSTN3Q9BQT9 956 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 ACBD3Q9H3P7 528 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 VIPAS39Q9H9C1 493 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 ZDHHC18Q9NUE0 388 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 GMIPQ9P107 970 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 WHRNQ9P202 907 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms