RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 EFEMP1Q12805 493 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 FOXC1Q12948 553 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 EDRF1Q3B7T1 1238 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 SLC4A11Q8NBS3 891 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 FBXL13Q8NEE6 735 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 DEFB124Q8NES8 71 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 P2RY11Q96G91 374 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 GABRG3Q99928 467 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 SLC6A17Q9H1V8 727 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 CD248Q9HCU0 757 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 FSCN3Q9NQT6 498 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 RAB20Q9NX57 234 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 CLIC5Q9NZA1 410 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 ATP6V1DQ9Y5K8 247 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 PCNX2A6NKB5 2137 aa22.13■■□□□ 1.13
COL9A3-207ENST00000467819 PCDH15Q96QU1 1955 aa22.12■■□□□ 1.13
COL9A3-207ENST00000467819 KLKB1P03952 638 aa22.12■■□□□ 1.13
COL9A3-207ENST00000467819 EPB41P11171 864 aaKnown RBP22.12■■□□□ 1.13
COL9A3-207ENST00000467819 CSRP1P21291 193 aaKnown RBP22.12■■□□□ 1.13
COL9A3-207ENST00000467819 CORO1AP31146 461 aaKnown RBP22.12■■□□□ 1.13
COL9A3-207ENST00000467819 RAD23BP54727 409 aa22.12■■□□□ 1.13
COL9A3-207ENST00000467819 SLC23A3Q6PIS1 610 aa22.12■■□□□ 1.13
COL9A3-207ENST00000467819 TMEM176AQ96HP8 235 aa22.12■■□□□ 1.13
COL9A3-207ENST00000467819 CDK5RAP1Q96SZ6 601 aaKnown RBP22.12■■□□□ 1.13
COL9A3-207ENST00000467819 CD93Q9NPY3 652 aa22.12■■□□□ 1.13
COL9A3-207ENST00000467819 WASH3PC4AMC7 463 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 CETN3O15182 167 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 CEACAM1P13688 526 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 COG7P83436 770 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 ZNF33AQ06730 810 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 PNOCQ13519 176 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 TCERG1LQ5VWI1 586 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 PEAR1Q5VY43 1037 aaPredicted RBP22.11■■□□□ 1.13
COL9A3-207ENST00000467819 ZNF276Q8N554 614 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 TTC39CQ8N584 583 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 TATDN2Q93075 761 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 GTPBP2Q9BX10 602 aaKnown RBP22.11■■□□□ 1.13
COL9A3-207ENST00000467819 ZNF510Q9Y2H8 683 aa22.11■■□□□ 1.13
COL9A3-207ENST00000467819 STX10O60499 249 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 ZNF217O75362 1048 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 HOXD12P35452 270 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 DUOXA1Q1HG43 343 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 DCAF17Q5H9S7 520 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-207ENST00000467819 KIAA1324Q6UXG2 1013 aaKnown RBP22.1■■□□□ 1.13
COL9A3-207ENST00000467819 RSRC2Q7L4I2 434 aaKnown RBP22.1■■□□□ 1.13
COL9A3-207ENST00000467819 PIGZQ86VD9 579 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 SLC41A1Q8IVJ1 513 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 CCDC34Q96HJ3 373 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 FAXDC2Q96IV6 333 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 DCLK3Q9C098 648 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 FBXO10Q9UK96 956 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 SLC6A14Q9UN76 642 aa22.1■■□□□ 1.13
COL9A3-207ENST00000467819 IGF2RP11717 2491 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 ZFHX4Q86UP3 3567 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CKAP5Q14008 2032 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 GFRA2O00451 464 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 PENKP01210 267 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-207ENST00000467819 SPINK2P20155 84 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CHKAP35790 457 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 ATXN3P54252 364 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-207ENST00000467819 MCCD1P59942 119 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-207ENST00000467819 YWHAGP61981 247 aaKnown RBP eCLIP22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CBWD6Q4V339 395 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CBWD3Q5JTY5 395 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CBWD5Q5RIA9 395 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 FYB2Q5VWT5 728 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 ARHGAP17Q68EM7 881 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 ARHGAP18Q8N392 663 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CEP76Q8TAP6 659 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 MRGPRX1Q96LB2 322 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 HSPA12BQ96MM6 686 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 MARCH2Q9P0N8 246 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 STRIP2Q9ULQ0 834 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 STON1Q9Y6Q2 735 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CFAP47Q6ZTR5 3102 aa22.09■■□□□ 1.13
COL9A3-207ENST00000467819 CHD6Q8TD26 2715 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 SLC12A8A0AV02 714 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 TOP3BO95985 862 aaKnown RBP22.08■■□□□ 1.13
COL9A3-207ENST00000467819 PRCPP42785 496 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 TKTL1P51854 596 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 MFAP3P55082 362 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 SLC8A3P57103 927 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 GFPT1Q06210 699 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-207ENST00000467819 GEN1Q17RS7 908 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 GOLGA7BQ2TAP0 167 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 RAB41Q5JT25 222 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 DENND1CQ8IV53 801 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 TRIML1Q8N9V2 468 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 ANKRD52Q8NB46 1076 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 ULBP1Q9BZM6 244 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 UBXN6Q9BZV1 441 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 AGO1Q9UL18 857 aaKnown RBP22.08■■□□□ 1.13
COL9A3-207ENST00000467819 SLC27A6Q9Y2P4 619 aa22.08■■□□□ 1.13
COL9A3-207ENST00000467819 TULP2O00295 520 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 NDUFS2O75306 463 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 SERPINF2P08697 491 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 STARD3Q14849 445 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 RABEPKQ7Z6M1 372 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 RGL4Q8IZJ4 473 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 NDRG1Q92597 394 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms