RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 SCAMP5Q8TAC9 235 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 CCDC127Q96BQ5 260 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 TSG101Q99816 390 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 HSD3B7Q9H2F3 369 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 CCSER2Q9H7U1 834 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 VRTNQ9H8Y1 702 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 CD248Q9HCU0 757 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 DMAP1Q9NPF5 467 aaPredicted RBP16.6■□□□□ 0.25
TSSC4-208ENST00000467308 FSCN3Q9NQT6 498 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 NXF1Q9UBU9 619 aaKnown RBP16.6■□□□□ 0.25
TSSC4-208ENST00000467308 LHX6Q9UPM6 363 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 NFE2L3Q9Y4A8 694 aa16.6■□□□□ 0.25
TSSC4-208ENST00000467308 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 MYH10P35580 1976 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 FGFR1OPO95684 399 aaKnown RBP16.59■□□□□ 0.25
TSSC4-208ENST00000467308 CD59P13987 128 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 MYL6P60660 151 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 GRAMD4Q6IC98 578 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 SDE2Q6IQ49 451 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 PAQR9Q6ZVX9 377 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 RAB44Q7Z6P3 723 aaPredicted RBP16.59■□□□□ 0.25
TSSC4-208ENST00000467308 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 DEFB119Q8N690 84 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 SMARCD1Q96GM5 515 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 TNIP3Q96KP6 325 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 GABRG3Q99928 467 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 NACA2Q9H009 215 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
TSSC4-208ENST00000467308 FAM124BQ9H5Z6 455 aaPredicted RBP16.59■□□□□ 0.25
TSSC4-208ENST00000467308 CALUO43852 315 aaPredicted RBP16.58■□□□□ 0.24
TSSC4-208ENST00000467308 CACNG3O60359 315 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 CAPNS1P04632 268 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 NDUFV2P19404 249 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 CYP2J2P51589 502 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 STX17P56962 302 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 FAM193AP78312 1265 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
TSSC4-208ENST00000467308 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 SARM1Q6SZW1 724 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 HTR3DQ70Z44 454 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 SLC9A9Q8IVB4 645 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 SLC41A1Q8IVJ1 513 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 NELFCDQ8IXH7 590 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 CHPFQ8IZ52 775 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 CHCHD4Q8N4Q1 142 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 IPO4Q8TEX9 1081 aaKnown RBP16.58■□□□□ 0.24
TSSC4-208ENST00000467308 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 ZNF419Q96HQ0 510 aaPredicted RBP16.58■□□□□ 0.24
TSSC4-208ENST00000467308 HSPA12BQ96MM6 686 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 CEP63Q96MT8 703 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 XPO6Q96QU8 1125 aaKnown RBP16.58■□□□□ 0.24
TSSC4-208ENST00000467308 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 DNAJC17Q9NVM6 304 aaKnown RBP16.58■□□□□ 0.24
TSSC4-208ENST00000467308 FANCLQ9NW38 375 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 MARK1Q9P0L2 795 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 GMIPQ9P107 970 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 WDR35Q9P2L0 1181 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 SUSD2Q9UGT4 822 aa16.58■□□□□ 0.24
TSSC4-208ENST00000467308 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 TRIM24O15164 1050 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 GREM1O60565 184 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 TLR5O60602 858 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 GJB3O75712 270 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 RPL13P26373 211 aaKnown RBP16.57■□□□□ 0.24
TSSC4-208ENST00000467308 WASP42768 502 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 PROSER1Q86XN7 944 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 FOXJ1Q92949 421 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 WBP2Q969T9 261 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 ACOX2Q99424 681 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 BBS2Q9BXC9 721 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 FBXO44Q9H4M3 255 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 SMYD3Q9H7B4 428 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 CYP8B1Q9UNU6 501 aa16.57■□□□□ 0.24
TSSC4-208ENST00000467308 NEDD8-MDP1E9PL57 170 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 TAF4O00268 1085 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 GFRA2O00451 464 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 CLIC2O15247 247 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 PHACTR2O75167 634 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 AP1G2O75843 785 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 IRF1P10914 325 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 TYRP14679 529 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 GNSP15586 552 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 AP3M2P53677 418 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 CDH8P55286 799 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 GOLGA8FQ08AF8 430 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 GOLGA8DPQ0D2H9 430 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 TRIP6Q15654 476 aaKnown RBP16.56■□□□□ 0.24
TSSC4-208ENST00000467308 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
TSSC4-208ENST00000467308 ZNF699Q32M78 642 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 PLEKHG6Q3KR16 790 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 SYCP2LQ5T4T6 812 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 IRF2BP1Q8IU81 584 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 FAM114A1Q8IWE2 563 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 FUKQ8N0W3 1084 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 OR2I1PQ8NGU4 316 aa16.56■□□□□ 0.24
TSSC4-208ENST00000467308 MRGPRX1Q96LB2 322 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms